Home
About
Browse
Covid-19
Organism Classification
Alphafold Collection
Indian Data
Contact
Search Type
PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
4CK6
pdb_00004ck6
10.2210/pdb4ck6/pdb
Download file
FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
ELECTRON MICROSCOPY
Sample
MICROTUBULE-BOUND HUMAN KINESIN-5 MOTOR DOMAIN
Specimen Preperation
Sample Aggregation State
FILAMENT
Vitrification Instrument
FEI VITROBOT MARK I
Cryogen Name
ETHANE
Sample Vitrification Details
LIQUID ETHANE
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
10692
Reported Resolution (Å)
9.2
Resolution Method
?
Other Details
THE N-TERMINAL SEQUENCE, ABSENT IN THE CRYSTALLOGRAPHIC MODEL, WAS MODELLED USING MODELLER. SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-2533. (DEPOSITION ID: 12198).
Refinement Type
Symmetry Type
HELICAL
Map-Model Fitting and Refinement
ID
1
Refinement Space
REAL
Refinement Protocol
FLEXIBLE FIT
Refinement Target
Cross-correlation coefficient
Overall B Value
?
Fitting Procedure
?
Details
METHOD--FLEXIBLE REFINEMENT PROTOCOL--X-RAY
Data Acquisition
Detector Type
KODAK SO-163 FILM
Electron Dose (electrons/Å
2
)
18
Imaging Experiment
Date of Experiment
2011-03-10
Temprature (Kelvin)
Microscope Model
FEI TECNAI F20
Minimum Defocus (nm)
700
Maximum Defocus (nm)
2500
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
2.0
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
.
Nominal Magnification
50000
Calibrated Magnification
?
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
200
Imaging Details
?
Imaging Experiment
Task
Software Package
Version
MODEL FITTING
Flex-EM
?
MODEL FITTING
UCSF Chimera
?
RECONSTRUCTION
FREALIGN
?
RECONSTRUCTION
SPIDER
?
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
?
FREALIGN