ELECTRON MICROSCOPY

Sample

MATURE DENGUE VIRUS 1

Specimen Preperation
Sample Aggregation State PARTICLE
Vitrification Instrument FEI VITROBOT MARK IV
Cryogen Name ETHANE
Sample Vitrification Details LIQUID ETHANE
3D Reconstruction
Reconstruction Method SINGLE PARTICLE
Number of Particles 6412
Reported Resolution (Å) 4.5
Resolution Method ?
Other Details FTER MODELING THE STRUCTURES WERE REGULARIZED USING MOLECULAR DYNAMICS WITH FLEXIBLE MOLECULAR DYNAMICS WITH FLEXIBLE FITTING PROTOCOL. SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-2142.(DEPOSITION ID: 10897).
Refinement Type
Symmetry Type POINT
Map-Model Fitting and Refinement
ID 1
Refinement Space REAL
Refinement Protocol OTHER
Refinement Target ?
Overall B Value ?
Fitting Procedure ?
Details METHOD--LOCAL CORRELATION REFINEMENT PROTOCOL--X-RAY
Data Acquisition
Detector Type GATAN ULTRASCAN 4000 (4k x 4k)
Electron Dose (electrons/Å2) 18
Imaging Experiment
Date of Experiment 2011-12-16
Temprature (Kelvin)
Microscope Model FEI TITAN KRIOS
Minimum Defocus (nm) 989
Maximum Defocus (nm) 3441
Minimum Tilt Angle (degrees) ?
Maximum Tilt Angle (degrees) ?
Nominal CS 2.7
Imaging Mode BRIGHT FIELD
Specimen Holder Model .
Nominal Magnification 75000
Calibrated Magnification 75000
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 300
Imaging Details ?
Imaging Experiment
Task Software Package Version
MODEL FITTING UCSF Chimera ?
RECONSTRUCTION EMAN 1
RECONSTRUCTION EMAN 2
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
? WIENER FILTER WEIGHTING EACH PARTICLE DURING 3D RECONSTRUCTION
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