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PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
4CBF
pdb_00004cbf
10.2210/pdb4cbf/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
ELECTRON MICROSCOPY
Sample
MATURE DENGUE VIRUS SEROTYPE 4
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK IV
Cryogen Name
ETHANE
Sample Vitrification Details
LIQUID ETHANE
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
16602
Reported Resolution (Å)
4.1
Resolution Method
?
Other Details
MPSA SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-2485. (DEPOSITION ID: 12027).
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
ID
1
Refinement Space
REAL
Refinement Protocol
FLEXIBLE FIT
Refinement Target
REAL SPACE CORRELATION
Overall B Value
?
Fitting Procedure
?
Details
METHOD--FLEXIBLE REFINEMENT PROTOCOL--CRYO-EM
Data Acquisition
Detector Type
FEI FALCON I (4k x 4k)
Electron Dose (electrons/Å
2
)
18
Imaging Experiment
Date of Experiment
2012-04-14
Temprature (Kelvin)
Microscope Model
FEI TITAN KRIOS
Minimum Defocus (nm)
500
Maximum Defocus (nm)
3500
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
2.7
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
.
Nominal Magnification
125000
Calibrated Magnification
129629
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
300
Imaging Details
?
Imaging Experiment
Task
Software Package
Version
MODEL FITTING
CNS
?
MODEL FITTING
Coot
?
MODEL FITTING
UCSF Chimera
?
RECONSTRUCTION
EMAN
1
RECONSTRUCTION
EMAN
2
RECONSTRUCTION
MPSA
?
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
?
EACH PARTICLE