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PDB Id
Uniprot Id
Source Organism
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Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
4ATU
pdb_00004atu
10.2210/pdb4atu/pdb
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Validation File (XML)
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ELECTRON MICROSCOPY
Sample
DOUBLECORTIN-STABILISED MICROTUBULES
Specimen Preperation
Sample Aggregation State
FILAMENT
Vitrification Instrument
FEI VITROBOT MARK I
Cryogen Name
ETHANE
Sample Vitrification Details
CRYOGEN- ETHANE, HUMIDITY- 100, INSTRUMENT- FEI VITROBOT
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
146000
Reported Resolution (Å)
8.3
Resolution Method
?
Other Details
DOUBLECORTIN LINKER REGION 151-156 WAS MODELLED INTO THE EM MAP USING CHIMERA AND REFINED USING FLEX-EM SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-2095. (DEPOSITION ID: 10785).
Refinement Type
Symmetry Type
HELICAL
Map-Model Fitting and Refinement
ID
1
Refinement Space
REAL
Refinement Protocol
RIGID BODY FIT
Refinement Target
Cross-correlation coefficient
Overall B Value
?
Fitting Procedure
?
Details
METHOD--RIGID BODY
Data Acquisition
Detector Type
KODAK SO-163 FILM
Electron Dose (electrons/Å
2
)
17
Imaging Experiment
Date of Experiment
2010-10-01
Temprature (Kelvin)
Microscope Model
FEI TECNAI F20
Minimum Defocus (nm)
900
Maximum Defocus (nm)
3600
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
2.0
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
.
Nominal Magnification
50000
Calibrated Magnification
?
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
200
Imaging Details
?
Imaging Experiment
Task
Software Package
Version
MODEL FITTING
Flex-EM
?
MODEL FITTING
UCSF Chimera
?
RECONSTRUCTION
FREALIGN
?
RECONSTRUCTION
SPIDER
?
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
?
DONE WITH FREALIGN
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