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Alphafold Collection
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PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
4APW
pdb_00004apw
10.2210/pdb4apw/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
ELECTRON MICROSCOPY
Sample
FILAMENT STRUCTURE OF AN ACTIN -LIKE PROTEIN, ALP12, IN CLOSTRIDIUM TETANI
Specimen Preperation
Sample Aggregation State
FILAMENT
Vitrification Instrument
?
Cryogen Name
?
Sample Vitrification Details
NEGATIVELY STAINED
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
5582
Reported Resolution (Å)
19.7
Resolution Method
?
Other Details
SINGLE PARTICLE ANALYSIS USING EOS SOFTWARE PACKAGE SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-2068. (DEPOSITION ID: 10712).
Refinement Type
Symmetry Type
HELICAL
Map-Model Fitting and Refinement
ID
1
Refinement Space
REAL
Refinement Protocol
RIGID BODY FIT
Refinement Target
?
Overall B Value
?
Fitting Procedure
?
Details
METHOD--RIGID BODY REFINEMENT PROTOCOL--X-RAY
Data Acquisition
Detector Type
KODAK SO-163 FILM
Electron Dose (electrons/Å
2
)
?
Imaging Experiment
Date of Experiment
2011-09-06
Temprature (Kelvin)
Microscope Model
HITACHI H7600
Minimum Defocus (nm)
800
Maximum Defocus (nm)
5000
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
?
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
.
Nominal Magnification
40000
Calibrated Magnification
?
Source
LAB6
Acceleration Voltage (kV)
100
Imaging Details
?
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
?
EACH SCANNED IMAGE