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PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
3KK5
pdb_00003kk5
10.2210/pdb3kk5/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
ELECTRON MICROSCOPY
Sample
major capsid protein of sputnik
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
HOMEMADE PLUNGER
Cryogen Name
ETHANE
Sample Vitrification Details
flash-frozen on holey grids in liquid ethane
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
6780
Reported Resolution (Å)
10.6
Resolution Method
?
Other Details
EMAN
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
ID
1
Refinement Space
REAL
Refinement Protocol
RIGID BODY FIT
Refinement Target
Sumf
Overall B Value
?
Fitting Procedure
?
Details
REFINEMENT PROTOCOL--rigid body
Data Acquisition
Detector Type
GENERIC FILM
Electron Dose (electrons/Å
2
)
20
Imaging Experiment
Date of Experiment
?
Temprature (Kelvin)
Microscope Model
FEI/PHILIPS CM200FEG
Minimum Defocus (nm)
767
Maximum Defocus (nm)
3582
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
2.0
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
?
Nominal Magnification
38000
Calibrated Magnification
39190
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
200
Imaging Details
?
Imaging Experiment
Task
Software Package
Version
MODEL FITTING
EMfit
?
RECONSTRUCTION
EMAN
?
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
.
CTF parameters were calculated for particles in each micrograph.