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PDB Id
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Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
3JD7
?
?
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FASTA
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ELECTRON MICROSCOPY
Sample
Human coxsackievirus B3
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
GATAN CRYOPLUNGE 3
Cryogen Name
ETHANE
Sample Vitrification Details
Plunged into liquid ethane (GATAN CRYOPLUNGE 3)
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
57203
Reported Resolution (Å)
3.9
Resolution Method
FSC 0.143
Other Details
(Single particle--Applied symmetry: I)
Refinement Type
Symmetry Type
?
Map-Model Fitting and Refinement
ID
1
Refinement Space
REAL
Refinement Protocol
FLEXIBLE FIT
Refinement Target
Cross-correlation coefficient
Overall B Value
193
Fitting Procedure
Real-space refinement
Details
Initial local fitting was done using Chimera. Phenix was then used for real-space refinement.
Data Acquisition
Detector Type
FEI FALCON II (4k x 4k)
Electron Dose (electrons/Å
2
)
?
Imaging Experiment
Date of Experiment
2014-11-21
Temprature (Kelvin)
Microscope Model
FEI POLARA 300
Minimum Defocus (nm)
1362
Maximum Defocus (nm)
5875
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
2.0
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
SIDE ENTRY, EUCENTRIC
Nominal Magnification
?
Calibrated Magnification
?
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
300
Imaging Details
?
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
?
Each particle
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