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PDB Id
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Source Organism
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Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
3JC2
?
?
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FASTA
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MMCIF
Binary MMCIF
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Structure Factors
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Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
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ELECTRON MICROSCOPY
Sample
Sec61 protein conducting channel opened by the pre-prolactin signal sequence
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK I
Cryogen Name
ETHANE
Sample Vitrification Details
3 uL sample was added to the grid, incubated for 30 seconds at 4 C, blotted for 9 seconds, and then plunged into liquid ethane (FEI VITROBOT).
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
101339
Reported Resolution (Å)
3.6
Resolution Method
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Other Details
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Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
ID
1
Refinement Space
REAL
Refinement Protocol
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Refinement Target
R-factor
Overall B Value
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Fitting Procedure
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Details
DETAILS--Real-space fitting using Chimera and Coot followed by reciprocal-space refinement using REFMAC
Data Acquisition
Detector Type
FEI FALCON II (4k x 4k)
Electron Dose (electrons/Å
2
)
27
Imaging Experiment
Date of Experiment
2015-03-06
Temprature (Kelvin)
Microscope Model
FEI TITAN KRIOS
Minimum Defocus (nm)
2000
Maximum Defocus (nm)
3500
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
?
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
?
Nominal Magnification
59000
Calibrated Magnification
104478
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
300
Imaging Details
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Imaging Experiment
Task
Software Package
Version
MODEL FITTING
Coot
?
MODEL FITTING
REFMAC
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MODEL FITTING
UCSF Chimera
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RECONSTRUCTION
RELION
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Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details