ELECTRON MICROSCOPY

Sample

Quasi-HPV16 complexed with H16.U4 Fab

Specimen Preperation
Sample Aggregation State PARTICLE
Vitrification Instrument GATAN CRYOPLUNGE 3
Cryogen Name ETHANE
Sample Vitrification Details Plunged into liquid ethane (GATAN CRYOPLUNGE 3).
3D Reconstruction
Reconstruction Method SINGLE PARTICLE
Number of Particles 5806
Reported Resolution (Å) 12.0
Resolution Method FSC 0.5 CUT-OFF
Other Details (Single particle details: The particles were selected using semi-automatic program e2boxer.py.) (Single particle--Applied symmetry: I)
Refinement Type
Symmetry Type POINT
Map-Model Fitting and Refinement
ID 1
Refinement Space REAL
Refinement Protocol RIGID BODY FIT
Refinement Target ?
Overall B Value ?
Fitting Procedure ?
Details REFINEMENT PROTOCOL--rigid body
Data Acquisition
Detector Type GATAN ULTRASCAN 4000 (4k x 4k)
Electron Dose (electrons/Å2) 15
Imaging Experiment
Date of Experiment 2014-07-22
Temprature (Kelvin)
Microscope Model JEOL 2100
Minimum Defocus (nm) 1600
Maximum Defocus (nm) 5430
Minimum Tilt Angle (degrees) ?
Maximum Tilt Angle (degrees) ?
Nominal CS 2
Imaging Mode BRIGHT FIELD
Specimen Holder Model GATAN LIQUID NITROGEN
Nominal Magnification 50000
Calibrated Magnification ?
Source LAB6
Acceleration Voltage (kV) 200
Imaging Details ?
Imaging Experiment
Task Software Package Version
MODEL FITTING Situs ?
MODEL FITTING UCSF Chimera ?
RECONSTRUCTION Auto3DEM ?
RECONSTRUCTION EMAN 2
RECONSTRUCTION RELION ?
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
. each particle
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