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Organism Classification
Alphafold Collection
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Search Type
PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
3J0J
ELECTRON MICROSCOPY
Sample
Detergent solubilized membrane protein complex
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK III
Cryogen Name
ETHANE
Sample Vitrification Details
Vitrification from 4 degree Celsius environment
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
46105
Reported Resolution (Å)
9.7
Resolution Method
?
Other Details
Frealign and new software used for refinement and reconstruction
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
ID
1
Refinement Space
REAL
Refinement Protocol
FLEXIBLE FIT
Refinement Target
correlation coefficient (UCSF chimera, rigid) and imodfit (flexible)
Overall B Value
?
Fitting Procedure
?
Details
REFINEMENT PROTOCOL--rigid (subunit A, B, D, F, E, and G) and flexible fitting (subunit C)
Data Acquisition
Detector Type
GENERIC FILM
Electron Dose (electrons/Å
2
)
0.18
Imaging Experiment
Date of Experiment
2010-01-01
Temprature (Kelvin)
Microscope Model
FEI TECNAI F20
Minimum Defocus (nm)
2500
Maximum Defocus (nm)
4500
Minimum Tilt Angle (degrees)
0
Maximum Tilt Angle (degrees)
0
Nominal CS
2.0
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
?
Nominal Magnification
50000
Calibrated Magnification
50000
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
200
Imaging Details
?
Imaging Experiment
Task
Software Package
Version
MODEL FITTING
iMODFIT
?
MODEL FITTING
UCSF Chimera
?
RECONSTRUCTION
Build_Fspace
?
RECONSTRUCTION
FREALIGN
?
RECONSTRUCTION
Refine_Fspace
?
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
.
Each particle