ELECTRON MICROSCOPY

Sample

BOVINE PAPILLOMAVIRUS TYPE 1 (BPV1), FULL VIRION

Specimen Preperation
Sample Aggregation State PARTICLE
Vitrification Instrument HOMEMADE PLUNGER
Cryogen Name ETHANE
Sample Vitrification Details VITRIFICATION CARRIED OUT IN COLD ROOM.
3D Reconstruction
Reconstruction Method SINGLE PARTICLE
Number of Particles 3997
Reported Resolution (Å) 4.200
Resolution Method ?
Other Details EWALD SPHERE CORRECTION
Refinement Type
Symmetry Type POINT
Map-Model Fitting and Refinement
ID 1
Refinement Space RECIPROCAL
Refinement Protocol RIGID BODY FIT
Refinement Target MLHL TARGET WITH AMPL. AND PHASE PROBABILITY DISTRIBUTION
Overall B Value 131
Fitting Procedure ?
Details METHOD--RIGID BODY DOCKING, THEN COORDINATE REFINEMENT IN CNS REFINEMENT PROTOCOL--SEE 3D-FITTING DETAILS
Data Acquisition
Detector Type KODAK SO-163 FILM
Electron Dose (electrons/Å2) 25.00
Imaging Experiment
Date of Experiment 2008-12-07
Temprature (Kelvin)
Microscope Model FEI TECNAI F30
Minimum Defocus (nm) 1800.00
Maximum Defocus (nm) 2900.00
Minimum Tilt Angle (degrees) 0.00
Maximum Tilt Angle (degrees) 0.00
Nominal CS 2.00
Imaging Mode BRIGHT FIELD
Specimen Holder Model .
Nominal Magnification 59000
Calibrated Magnification 56588
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 300
Imaging Details OBJ APERTURE CUTOFF AT 2.4A
Imaging Experiment
Task Software Package Version
MODEL FITTING CNS ?
RECONSTRUCTION FREALIGN ?
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
. CTFILT3 WITH INDIVIDUAL PARTICLE ADJUSTMENT