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Protein Name
Method
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Structure Feature
Experiment
Ligands & Environment
2K97
pdb_00002k97
10.2210/pdb2k97/pdb
Download file
FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Ionic Strength
Solvent
pH
Pressure
Temprature (K)
1
2D 1H-1H NOESY
0.1-4.0 mM DNA (cyclic D(*DCP*DGP*DCP*DTP*DCP*DCP*DGP*DTP)), 25 mM sodium phosphate, 100 mM sodium chloride, 90% H2O/10% D2O
?
90% H2O/10% D2O
7
ambient
308
2
2D 1H-1H TOCSY
0.1-4.0 mM DNA (cyclic D(*DCP*DGP*DCP*DTP*DCP*DCP*DGP*DTP)), 25 mM sodium phosphate, 100 mM sodium chloride, 90% H2O/10% D2O
?
90% H2O/10% D2O
7
ambient
308
3
2D DQF-COSY
0.1-4.0 mM DNA (cyclic D(*DCP*DGP*DCP*DTP*DCP*DCP*DGP*DTP)), 25 mM sodium phosphate, 100 mM sodium chloride, 90% H2O/10% D2O
?
90% H2O/10% D2O
7
ambient
308
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
NMR Refinement
Method
Details
Software
molecular dynamics
?
1
NMR Ensemble Information
Conformer Selection Criteria
all calculated structures submitted
Conformers Calculated Total Number
10
Conformers Submitted Total Number
10
Representative Model
1 (lowest energy)
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
structure solution
.
Amber
Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm
2
structure solution
.
DYANA
Guntert, Braun and Wuthrich
3
chemical shift assignment
.
Sparky
Goddard
4
peak picking
.
Sparky
Goddard
5
data analysis
.
Sparky
Goddard
6
refinement
.
DYANA
Guntert, Braun and Wuthrich
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