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PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
2YGD
pdb_00002ygd
10.2210/pdb2ygd/pdb
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ELECTRON MICROSCOPY
Sample
HUMAN ALPHAB CRYSTALLIN
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
?
Cryogen Name
ETHANE
Sample Vitrification Details
VITRIFICATION 1 -- CRYOGEN- ETHANE, HUMIDITY- 50, METHOD- BLOT FOR 1 SECOND BEFORE PLUNGING,
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
17560
Reported Resolution (Å)
9.4
Resolution Method
?
Other Details
SUBMISSION BASED ON EXPERIMENTAL DATA EMDB EMD-1894.(DEPOSITION ID: 7925).
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
ID
1
Refinement Space
?
Refinement Protocol
?
Refinement Target
?
Overall B Value
?
Fitting Procedure
?
Details
?
Data Acquisition
Detector Type
?
Electron Dose (electrons/Å
2
)
10
Imaging Experiment
Date of Experiment
?
Temprature (Kelvin)
Microscope Model
JEOL 2010HT
Minimum Defocus (nm)
600
Maximum Defocus (nm)
1500
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
?
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
.
Nominal Magnification
50000
Calibrated Magnification
47000
Source
LAB6
Acceleration Voltage (kV)
120
Imaging Details
?
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
?
EACH MICROGRAPH, PHASE FLIPPING