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PDB Id
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Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
2XQL
pdb_00002xql
10.2210/pdb2xql/pdb
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Validation File (XML)
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ELECTRON MICROSCOPY
Sample
NUCLEOPLASMIN H2A-H2B HISTONES COMPLEX.
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
Cryogen Name
Sample Vitrification Details
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
5557
Reported Resolution (Å)
19.5
Resolution Method
?
Other Details
DOCKING OF FIVE DIMERS OF H2A-H2B HISTONES IN THE NUCLEOPLASMIN H2A-H2B COMPLEX (1 5-5). THE EXTENDED REGION OF THE H2A HISTONE WAS REMOVED. THE FINAL DOCKING INCLUDES THE FRAGMENTS FROM AMINOACID 15 TO 105 OF H2A HISTONE AND 36 TO 125 OF H2B HISTONE. SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-1777. (DEPOSITION ID: 7474).
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
ID
1
Refinement Space
REAL
Refinement Protocol
OTHER
Refinement Target
?
Overall B Value
?
Fitting Procedure
?
Details
METHOD--VOLUMETRIC CORRELATION REFINEMENT PROTOCOL--PROJECTION MATCHING
Data Acquisition
Detector Type
KODAK SO-163 FILM
Electron Dose (electrons/Å
2
)
?
Imaging Experiment
Date of Experiment
?
Temprature (Kelvin)
Microscope Model
JEOL 1200EXII
Minimum Defocus (nm)
1000
Maximum Defocus (nm)
2500
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
5.6
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
.
Nominal Magnification
60000
Calibrated Magnification
?
Source
TUNGSTEN HAIRPIN
Acceleration Voltage (kV)
100
Imaging Details
?
Imaging Experiment
Task
Software Package
Version
MODEL FITTING
Situs
?
RECONSTRUCTION
EMAN
?
RECONSTRUCTION
SPIDER
?
RECONSTRUCTION
Xmipp
?
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
?
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