SOLUTION NMR


NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D 1H-15N HSQC 300 uM [U-13C; U-15N] Msi1 RBD1-1, 300 uM RNA-2, 20 mM MES-3, 5 mM DTT-4, 95% H2O/5% D2O ? 95% H2O/5% D2O 6.0 ambient 298
2 2D 1H-13C HSQC 300 uM [U-13C; U-15N] Msi1 RBD1-1, 300 uM RNA-2, 20 mM MES-3, 5 mM DTT-4, 95% H2O/5% D2O ? 95% H2O/5% D2O 6.0 ambient 298
3 2D 1H-1H TOCSY 300 uM [U-13C; U-15N] Msi1 RBD1-1, 300 uM RNA-2, 20 mM MES-3, 5 mM DTT-4, 95% H2O/5% D2O ? 95% H2O/5% D2O 6.0 ambient 298
4 2D DQF-COSY 300 uM [U-13C; U-15N] Msi1 RBD1-1, 300 uM RNA-2, 20 mM MES-3, 5 mM DTT-4, 95% H2O/5% D2O ? 95% H2O/5% D2O 6.0 ambient 298
5 3D 1H-15N NOESY 300 uM [U-13C; U-15N] Msi1 RBD1-1, 300 uM RNA-2, 20 mM MES-3, 5 mM DTT-4, 95% H2O/5% D2O ? 95% H2O/5% D2O 6.0 ambient 298
6 3D 1H-13C NOESY 300 uM [U-13C; U-15N] Msi1 RBD1-1, 300 uM RNA-2, 20 mM MES-3, 5 mM DTT-4, 95% H2O/5% D2O ? 95% H2O/5% D2O 6.0 ambient 298
7 3D HNCO 300 uM [U-13C; U-15N] Msi1 RBD1-1, 300 uM RNA-2, 20 mM MES-3, 5 mM DTT-4, 95% H2O/5% D2O ? 95% H2O/5% D2O 6.0 ambient 298
8 3D HNCA 300 uM [U-13C; U-15N] Msi1 RBD1-1, 300 uM RNA-2, 20 mM MES-3, 5 mM DTT-4, 95% H2O/5% D2O ? 95% H2O/5% D2O 6.0 ambient 298
9 3D HNCACB 300 uM [U-13C; U-15N] Msi1 RBD1-1, 300 uM RNA-2, 20 mM MES-3, 5 mM DTT-4, 95% H2O/5% D2O ? 95% H2O/5% D2O 6.0 ambient 298
10 3D CBCA(CO)NH 300 uM [U-13C; U-15N] Msi1 RBD1-1, 300 uM RNA-2, 20 mM MES-3, 5 mM DTT-4, 95% H2O/5% D2O ? 95% H2O/5% D2O 6.0 ambient 298
11 3D HBHA(CO)NH 300 uM [U-13C; U-15N] Msi1 RBD1-1, 300 uM RNA-2, 20 mM MES-3, 5 mM DTT-4, 95% H2O/5% D2O ? 95% H2O/5% D2O 6.0 ambient 298
12 3D HCCH-TOCSY 300 uM [U-13C; U-15N] Msi1 RBD1-1, 300 uM RNA-2, 20 mM MES-3, 5 mM DTT-4, 95% H2O/5% D2O ? 95% H2O/5% D2O 6.0 ambient 298
13 3D HN(CO)CA 300 uM [U-13C; U-15N] Msi1 RBD1-1, 300 uM RNA-2, 20 mM MES-3, 5 mM DTT-4, 95% H2O/5% D2O ? 95% H2O/5% D2O 6.0 ambient 298
14 2D 13C-15N [f1,f2]-filtered NOESY 300 uM [U-13C; U-15N] Msi1 RBD1-1, 300 uM RNA-2, 20 mM MES-3, 5 mM DTT-4, 95% H2O/5% D2O ? 95% H2O/5% D2O 6.0 ambient 298
15 2D 13C-15N [f2]-filtered NOESY 300 uM [U-13C; U-15N] Msi1 RBD1-1, 300 uM RNA-2, 20 mM MES-3, 5 mM DTT-4, 95% H2O/5% D2O ? 95% H2O/5% D2O 6.0 ambient 298
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
NMR Refinement
Method Details Software
simulated annealing ? 1
NMR Ensemble Information
Conformer Selection Criteria structures with the least restraint violations
Conformers Calculated Total Number 200
Conformers Submitted Total Number 20
Representative Model 1 (fewest violations)
Computation: NMR Software
# Classification Version Software Name Author
1 geometry optimization 9 Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm
2 structure solution 2.1 CYANA Guntert, Mumenthaler and Wuthrich
3 refinement ? Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm