SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 3D 1H-15N NOESY 0.8mM [U-13C; U-15N] SHP-1 C-terminal SH2 domain; 0.8mM tyrosine-phosphorylated peptide; 20mM [U-2H] TRIS; 100mM sodium chloride; 0.02% sodium azide; 1mM [U-2H] DTT; 90% H2O/10% D2O 120 90% H2O/10% D2O 7.4 ambient ?
2 3D 1H-13C NOESY 0.8mM [U-13C; U-15N] SHP-1 C-terminal SH2 domain; 0.8mM tyrosine-phosphorylated peptide; 20mM [U-2H] TRIS; 100mM sodium chloride; 0.02% sodium azide; 1mM [U-2H] DTT; 90% H2O/10% D2O 120 90% H2O/10% D2O 7.4 ambient ?
3 3D F1-15N,13C-filtered 15N-separated NOESY 0.8mM [U-13C; U-15N] SHP-1 C-terminal SH2 domain; 0.8mM tyrosine-phosphorylated peptide; 20mM [U-2H] TRIS; 100mM sodium chloride; 0.02% sodium azide; 1mM [U-2H] DTT; 90% H2O/10% D2O 120 90% H2O/10% D2O 7.4 ambient ?
4 3D F1-15N,13C-filtered 13C-separated NOESY 0.8mM [U-13C; U-15N] SHP-1 C-terminal SH2 domain; 0.8mM tyrosine-phosphorylated peptide; 20mM [U-2H] TRIS; 100mM sodium chloride; 0.02% sodium azide; 1mM [U-2H] DTT; 90% H2O/10% D2O 120 90% H2O/10% D2O 7.4 ambient ?
5 2D F2-15N,13C-filtered NOESY 0.8mM [U-13C; U-15N] SHP-1 C-terminal SH2 domain; 0.8mM tyrosine-phosphorylated peptide; 20mM [U-2H] TRIS; 100mM sodium chloride; 0.02% sodium azide; 1mM [U-2H] DTT; 90% H2O/10% D2O 120 90% H2O/10% D2O 7.4 ambient ?
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
1 Bruker AVANCE 800
NMR Refinement
Method Details Software
torsion angle dynamics, simulated annealing ? 1
NMR Ensemble Information
Conformer Selection Criteria target function
Conformers Calculated Total Number 100
Conformers Submitted Total Number 20
Representative Model 1 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 collection 3.6 XwinNMR Bruker Biospin
2 processing 2.3 NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3 data analysis 5.0.4 NMRView Johnson, One Moon Scientific
4 peak picking 5.0.4 NMRView Johnson, One Moon Scientific
5 chemical shift assignment 5.0.4 NMRView Johnson, One Moon Scientific
6 data analysis 0.9810 KUJIRA Kobayashi, N.
7 peak picking 0.9810 KUJIRA Kobayashi, N.
8 chemical shift assignment 0.9810 KUJIRA Kobayashi, N.
9 structure solution 2.0.17 CYANA Guntert, Mumenthaler and Wuthrich
10 refinement 2.0.17 CYANA Guntert, Mumenthaler and Wuthrich
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