ELECTRON MICROSCOPY

Sample

Fab Fragment of MAb 1A1D-2 complexed with Dengue 2 virus

Specimen Preperation
Sample Aggregation State PARTICLE
Vitrification Instrument HOMEMADE PLUNGER
Cryogen Name ETHANE
Sample Vitrification Details SAMPLES WERE PREPARED AS THIN LAYERS OF VITREOUS ICE AND MAINTAINED AT LIQUID NITROGEN TEMPERATURE IN THE ELECTRON MICROSCOPE
3D Reconstruction
Reconstruction Method SINGLE PARTICLE
Number of Particles 2885
Reported Resolution (Å) 24
Resolution Method ?
Other Details THE COORDINATES IN THIS ENTRY CONTAIN CA ONLY
Refinement Type
Symmetry Type POINT
Map-Model Fitting and Refinement
ID 1
Refinement Space REAL
Refinement Protocol RIGID BODY FIT
Refinement Target Using EMFIT
Overall B Value ?
Fitting Procedure ?
Details METHOD--place coordinates manually and then optimise position using program REFINEMENT PROTOCOL--rigid body
Data Acquisition
Detector Type KODAK SO-163 FILM
Electron Dose (electrons/Å2) 2.39
Imaging Experiment
Date of Experiment 2007-03-21
Temprature (Kelvin)
Microscope Model FEI/PHILIPS CM200T
Minimum Defocus (nm) 2276
Maximum Defocus (nm) 3373
Minimum Tilt Angle (degrees) 0.00
Maximum Tilt Angle (degrees) 0.00
Nominal CS 2.00
Imaging Mode BRIGHT FIELD
Specimen Holder Model ?
Nominal Magnification 50000
Calibrated Magnification 51040
Source FIELD EMISSION GUN
Acceleration Voltage (kV) 200
Imaging Details low dose
Imaging Experiment
Task Software Package Version
MODEL FITTING EMfit ?
RECONSTRUCTION SPIDER ?
RECONSTRUCTION Xmipp ?
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
. phase flip
Feedback Form
Name
Email
Institute
Feedback