SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D NOESY 80 mM NaCl, 10 mM sodium phosphate, 0.5 mM Na2EDTA, pH 7.1, 0.7mM RNA duplex concentration, 90% H2O, 10% D2O ? 90% H2O/10% D2O 7.1 ? 278
2 2D TOCSY 80 mM NaCl, 10 mM sodium phosphate, 0.5 mM Na2EDTA, pH 7.1, 0.7mM RNA duplex concentration, 90% H2O, 10% D2O ? 90% H2O/10% D2O 7.1 ? 278
3 DQF-COSY 80 mM NaCl, 10 mM sodium phosphate, 0.5 mM Na2EDTA, pH 7.1, 0.7mM RNA duplex concentration, 90% H2O, 10% D2O ? 90% H2O/10% D2O 7.1 ? 278
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
NMR Refinement
Method Details Software
simulated annealing, molecular dynamics ? 1
NMR Ensemble Information
Conformer Selection Criteria structures with the least restraint violations,structures with the lowest energy
Conformers Calculated Total Number 20
Conformers Submitted Total Number 18
Representative Model 1 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 collection 6.1C VNMR Varian
2 processing 2.3 NMRPipe Delagio, F.
3 data analysis 3.11 Sparky Goddard, T.D.; Kneller, D.G.
4 structure solution I2000 Discover Molecular Simulations, Inc.
5 refinement I2000 Discover Molecular Simulations, Inc.