SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D 1H-15N HSQC 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT, 93% H2O/7% D2O .12 93% H2O/7% D2O 7 ambient 293
2 2D 1H-13C HSQC aliphatic 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT, 93% H2O/7% D2O .12 93% H2O/7% D2O 7 ambient 293
3 3D HNCO 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT, 93% H2O/7% D2O .12 93% H2O/7% D2O 7 ambient 293
4 3D C(CO)NH 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT, 93% H2O/7% D2O .12 93% H2O/7% D2O 7 ambient 293
5 3D CBCA(CO)NH 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT, 93% H2O/7% D2O .12 93% H2O/7% D2O 7 ambient 293
6 3D HNCACB 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT, 93% H2O/7% D2O .12 93% H2O/7% D2O 7 ambient 293
7 3D 1H-15N NOESY 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT, 93% H2O/7% D2O .12 93% H2O/7% D2O 7 ambient 293
8 3D 1H-13C NOESY aliphatic 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT, 93% H2O/7% D2O .12 93% H2O/7% D2O 7 ambient 293
9 3D 1H-13C NOESY aromatic 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT, 93% H2O/7% D2O .12 93% H2O/7% D2O 7 ambient 293
10 3D H(CCO)NH 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT, 93% H2O/7% D2O .12 93% H2O/7% D2O 7 ambient 293
11 deuterium exchange 100 mM sodium chloride, 20 mM TRIS, 1 mM DTT, 93% H2O/7% D2O .12 93% H2O/7% D2O 7 ambient 293
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
NMR Refinement
Method Details Software
molecular dynamics STRUCTURE DETERMINATION WAS PERFORMED ITERATIVELY USING CYANA (AUTOMATED NOESY ASSIGNMENTS). A TOTAL OF 20 STRUCTURES OUT OF 100 WITH LOWEST TARGET FUNCTION FROM THE FINAL CYANA CALCULATION WERE TAKEN AND REFINED BY RESTRAINED MOLECULAR DYNAMICS/ENERGY MINIMIZATION IN EXPLICIT WATER (CNS) AFTER ADDING 0% TO THE UPPER BOUNDARY LIMIT OF THE DISTANCE RESTRAINTS AND THE VDW LIMIT TO THE LOWER RESTRAINT. PARAM19 WAS USED FOR THE WATER REFINEMENT CALCULATIONS. 1
NMR Ensemble Information
Conformer Selection Criteria target function
Conformers Calculated Total Number 100
Conformers Submitted Total Number 20
Representative Model 1 (closest to the average)
Computation: NMR Software
# Classification Version Software Name Author
1 structure solution 2.1 CYANA Guntert, Mumenthaler and Wuthrich
2 refinement 1.1 CNS Brunger, Adams, Clore, Gros, Nilges and Read
3 processing 2007 Felix Accelrys Software Inc.
4 data analysis 3.115 Sparky Goddard
5 peak picking 3.115 Sparky Goddard
6 data analysis 1.5 PSVS Bhattacharya and Montelione
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