SOLID-STATE NMR


NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 NCACX 15 mg [U-100% 13C; U-100% 15N] ASC filament, 90% H2O/10% D2O ? 90% H2O/10% D2O ? ambient 288
2 NCOCX 15 mg [U-100% 13C; U-100% 15N] ASC filament, 90% H2O/10% D2O ? 90% H2O/10% D2O ? ambient 288
3 NCACB 15 mg [U-100% 13C; U-100% 15N] ASC filament, 90% H2O/10% D2O ? 90% H2O/10% D2O ? ambient 288
4 CANCO 15 mg [U-100% 13C; U-100% 15N] ASC filament, 90% H2O/10% D2O ? 90% H2O/10% D2O ? ambient 288
5 CCC 15 mg [U-100% 13C; U-100% 15N] ASC filament, 90% H2O/10% D2O ? 90% H2O/10% D2O ? ambient 288
6 NCA 15 mg [U-100% 13C; U-100% 15N] ASC filament, 90% H2O/10% D2O ? 90% H2O/10% D2O ? ambient 288
7 NCO 15 mg [U-100% 13C; U-100% 15N] ASC filament, 90% H2O/10% D2O ? 90% H2O/10% D2O ? ambient 288
8 20msDARR 15 mg [U-100% 13C; U-100% 15N] ASC filament, 90% H2O/10% D2O ? 90% H2O/10% D2O ? ambient 288
9 N(CO)CACB 15 mg [U-100% 13C; U-100% 15N] ASC filament, 90% H2O/10% D2O ? 90% H2O/10% D2O ? ambient 288
10 CAN(CO)CA 15 mg [U-100% 13C; U-100% 15N] ASC filament, 90% H2O/10% D2O ? 90% H2O/10% D2O ? ambient 288
11 N(CA)CBCX 15 mg [U-100% 13C; U-100% 15N] ASC filament, 90% H2O/10% D2O ? 90% H2O/10% D2O ? ambient 288
12 100msPDSD 15 mg [U-100% 13C; U-100% 15N] ASC filament, 90% H2O/10% D2O ? 90% H2O/10% D2O ? ambient 288
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
1 Bruker AVANCE 850
NMR Refinement
Method Details Software
simulated annealing ? 4
NMR Ensemble Information
Conformer Selection Criteria structures with the lowest energy
Conformers Calculated Total Number 100
Conformers Submitted Total Number 10
Representative Model 1 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 chemical shift assignment ? CYANA Guntert, Mumenthaler and Wuthrich
2 data analysis ? CYANA Guntert, Mumenthaler and Wuthrich
3 structure solution ? CYANA Guntert, Mumenthaler and Wuthrich
4 refinement ? XPLOR-NIH Schwieters, Kuszewski, Tjandra and Clore

ELECTRON MICROSCOPY


Sample

Mouse ASC-PYD filament

Specimen Preperation
Sample Aggregation State FILAMENT
Vitrification Instrument FEI VITROBOT MARK IV
Cryogen Name ETHANE
Sample Vitrification Details Grids were blotted for one second before plunging into liquid ethane (FEI VITROBOT MARK IV).
3D Reconstruction
Reconstruction Method HELICAL
Number of Particles ?
Reported Resolution (Å) 4.0
Resolution Method FSC 0.5 CUT-OFF
Other Details ?
Refinement Type
Symmetry Type HELICAL
Map-Model Fitting and Refinement
ID 1
Refinement Space ?
Refinement Protocol ?
Refinement Target ?
Overall B Value ?
Fitting Procedure ?
Details ?
Data Acquisition
Detector Type DIRECT ELECTRON DE-10 (5k x 4k)
Electron Dose (electrons/Å2) 20
Imaging Experiment
Date of Experiment 2014-10-10
Temprature (Kelvin)
Microscope Model FEI TITAN KRIOS
Minimum Defocus (nm) ?
Maximum Defocus (nm) ?
Minimum Tilt Angle (degrees) -12
Maximum Tilt Angle (degrees) 12
Nominal CS ?
Imaging Mode DIFFRACTION
Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER
Nominal Magnification 22500
Calibrated Magnification ?
Source TUNGSTEN HAIRPIN
Acceleration Voltage (kV) 300
Imaging Details ?
Imaging Experiment
Task Software Package Version
RECONSTRUCTION EMAN 2
RECONSTRUCTION IHRSR ?
RECONSTRUCTION SPIDER ?
Image Processing
CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details
. CTFFIND3