SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D 1H-1H NOESY 0.7 mM DNA, 20 mM potassium phosphate, 70 mM potassium chloride, 90% H2O/10% D2O 90 90% H2O/10% D2O 8.0 ambient 298
2 2D 1H-1H COSY 0.7 mM DNA, 20 mM potassium phosphate, 70 mM potassium chloride, 90% H2O/10% D2O 90 90% H2O/10% D2O 8.0 ambient 298
3 2D 1H-1H TOCSY 0.7 mM DNA, 20 mM potassium phosphate, 70 mM potassium chloride, 90% H2O/10% D2O 90 90% H2O/10% D2O 8.0 ambient 298
4 2D 1H-13C HSQC aromatic 0.7 mM DNA, 20 mM potassium phosphate, 70 mM potassium chloride, 90% H2O/10% D2O 90 90% H2O/10% D2O 8.0 ambient 298
5 2D 1H-13C HSQC aliphatic 0.7 mM DNA, 20 mM potassium phosphate, 70 mM potassium chloride, 90% H2O/10% D2O 90 90% H2O/10% D2O 8.0 ambient 298
6 2D 1H-15N HSQC 0.7 mM DNA, 20 mM potassium phosphate, 70 mM potassium chloride, 90% H2O/10% D2O 90 90% H2O/10% D2O 8.0 ambient 298
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
NMR Refinement
Method Details Software
DGSA-distance geometry simulated annealing, simulated annealing, molecular dynamics ? 1
NMR Ensemble Information
Conformer Selection Criteria structures with the lowest energy
Conformers Calculated Total Number 100
Conformers Submitted Total Number 10
Representative Model 1 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 refinement ? X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore
2 structure solution ? X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore
3 refinement ? Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollman
4 chemical shift assignment ? Sparky Goddard
5 peak picking ? Sparky Goddard
6 data analysis ? Sparky Goddard
7 collection ? TopSpin Bruker Biospin