SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D 1H-1H TOCSY 2 mM AIK-18/51, 2 mM 5'-D(*CP*GP*AP*CP*TP*AP*GP*TP*CP*G)-3', 90% H2O/10% D2O 0.05 90% H2O/10% D2O 7.4 ambient 298
2 2D 1H-1H NOESY 2 mM AIK-18/51, 2 mM 5'-D(*CP*GP*AP*CP*TP*AP*GP*TP*CP*G)-3', 90% H2O/10% D2O 0.05 90% H2O/10% D2O 7.4 ambient 298
3 2D 1H-1H COSY 2 mM AIK-18/51, 2 mM 5'-D(*CP*GP*AP*CP*TP*AP*GP*TP*CP*G)-3', 90% H2O/10% D2O 0.05 90% H2O/10% D2O 7.4 ambient 298
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
1 Bruker AVANCE 600
NMR Refinement
Method Details Software
molecular dynamics ? 1
NMR Ensemble Information
Conformer Selection Criteria structures with the least restraint violations
Conformers Calculated Total Number 1
Conformers Submitted Total Number 1
Representative Model 1 (minimized average structure)
Computation: NMR Software
# Classification Version Software Name Author
1 collection ? TopSpin Bruker Biospin
2 processing ? TopSpin Bruker Biospin
3 chemical shift assignment ? Sparky Goddard
4 data analysis ? Sparky Goddard
5 peak picking ? Sparky Goddard
6 geometry optimization ? SYBYL Tripos
7 structure solution ? SYBYL Tripos
8 data analysis ? SYBYL Tripos
9 structure generation ? SYBYL Tripos
10 data analysis ? MARDIGRAS Tripos
11 structure solution ? MARDIGRAS Tripos
12 noe conversion to distances ? MARDIGRAS Tripos
13 structure solution ? Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman
14 refinement ? Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman
15 geometry optimization ? Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman