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Organism Classification
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Search Type
PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
2MMQ
pdb_00002mmq
10.2210/pdb2mmq/pdb
Download file
FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Ionic Strength
Solvent
pH
Pressure
Temprature (K)
1
2D 1H-1H COSY
0.5 mM DNA (5'-D(*CP*TP*AP*AP*(FAG)P*TP*TP*TP*CP*A)-3'), 0.5 mM DNA (5'-D(*TP*GP*AP*AP*AP*CP*TP*TP*AP*G)-3'), 100% D2O
0.1
100% D2O
7
ambient
283
2
2D 1H-1H NOESY
0.5 mM DNA (5'-D(*CP*TP*AP*AP*(FAG)P*TP*TP*TP*CP*A)-3'), 0.5 mM DNA (5'-D(*TP*GP*AP*AP*AP*CP*TP*TP*AP*G)-3'), 100% D2O
0.1
100% D2O
7
ambient
283
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
NMR Refinement
Method
Details
Software
DGSA-distance geometry simulated annealing
?
1
NMR Ensemble Information
Conformer Selection Criteria
back calculated data agree with experimental NOESY spectrum
Conformers Calculated Total Number
10
Conformers Submitted Total Number
1
Representative Model
1 (closest to the average)
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
chemical shift assignment
3.115
Sparky
Goddard
2
collection
?
TopSpin
Bruker Biospin
3
processing
?
TopSpin
Bruker Biospin
4
refinement
12
Amber
Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman