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PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
2MK1
pdb_00002mk1
10.2210/pdb2mk1/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Ionic Strength
Solvent
pH
Pressure
Temprature (K)
1
2D 1H-13C HSQC
3.2mM SUGAR (4-MER)-1, 100% D2O
0
100% D2O
7
ambient
275
2
2D 1H-1H TOCSY
3.2mM SUGAR (4-MER)-1, 100% D2O
0
100% D2O
7
ambient
275
3
2D 1H-1H NOESY
3.2mM SUGAR (4-MER)-1, 100% D2O
0
100% D2O
7
ambient
275
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Bruker
AVANCE
900
NMR Refinement
Method
Details
Software
simulated annealing
GLYCAM force field and implicit solvent
1
NMR Ensemble Information
Conformer Selection Criteria
structures with the least restraint violations
Conformers Calculated Total Number
200
Conformers Submitted Total Number
20
Representative Model
1 (closest to the average)
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
collection
?
TopSpin
Bruker Biospin
2
chemical shift assignment
?
Sparky
Goddard
3
peak picking
?
Sparky
Goddard
4
structure solution
?
CYANA
Guntert, Mumenthaler and Wuthrich
5
refinement
?
Amber
Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman
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