SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D 1H-15N HSQC 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
2 2D 1H-13C HSQC aliphatic 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
3 2D 1H-13C HSQC aromatic 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
4 3D CBCA(CO)NH 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
5 3D HNCO 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
6 3D HNCACB 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
7 3D HN(CO)CA 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
8 3D HBHA(CO)NH 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
9 3D HBHANH 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
10 3D 1H-15N NOESY 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
11 3D 1H-13C NOESY aliphatic 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
12 3D 1H-13C NOESY aromatic 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
13 1-D 13C 15N-filtered 1H 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
14 2D 1H-13C HSQC HBCBCGCDHD 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
15 2D 13C TROSY 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
16 2D 13C-15N F1-filtered NOESY-HSQC 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
17 2D 13C-15N F1-filtered TOCSY 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
18 3D HCCH-TOCSY aliphatic 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
19 3D HCCH-TOCSY aromatic 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
20 3D 13C,15 F1-filtered 13C F3-edited NOESY-HSQC aliphatic 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
21 3D 13C,15 F1-filtered 13C F3-edited NOESY-HSQC aromatic 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
22 3D 13C,15 F1-filtered 15N F3-edited NOESY-HSQC 0.5 mM [U-13C; U-15N] protein_1, 2.5 mM protein_2, 1 mM DTT, 0.01 w/v sodium azide, 20 mM sodium phosphate, 90% H2O/10% D2O 20 ? 6.3 ambient 298
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
NMR Refinement
Method Details Software
torsion angle dynamics, simulated annealing, simulated annealing in vacuo, water refinement using RECOORD scripts 1
NMR Ensemble Information
Conformer Selection Criteria structures with the lowest energy
Conformers Calculated Total Number 100
Conformers Submitted Total Number 20
Representative Model 1 (closest to the average)
Computation: NMR Software
# Classification Version Software Name Author
1 collection 3.1 TopSpin Bruker Biospin
2 processing 3.1 TopSpin Bruker Biospin
3 refinement 1.2 CNS Brunger, Adams, Clore, Gros, Nilges and Read
4 structure solution 1.2 CNS Brunger, Adams, Clore, Gros, Nilges and Read
5 chemical shift assignment 2.1 CYANA Guntert, Mumenthaler and Wuthrich
6 structure solution 2.1 CYANA Guntert, Mumenthaler and Wuthrich
7 peak picking 2.1 CCPN_Analysis CCPN
8 processing 2.1 CCPN_Analysis CCPN
9 data analysis 2.1 CCPN_Analysis CCPN
10 chemical shift assignment 2.1 CCPN_Analysis CCPN
11 dihedral angle calculation ? DANGLE Cheung et al, 2010, Journal of Magnetic Resonance, 202, 2: 223-233
12 refinement ? CYANA ?