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PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
2MBD
pdb_00002mbd
10.2210/pdb2mbd/pdb
Download file
FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Ionic Strength
Solvent
pH
Pressure
Temprature (K)
1
2D 1H-1H NOESY
4 mM lasiocepsin, 90% H2O/10% D2O
0
90% H2O/10% D2O
7
ambient
298
2
2D 1H-1H TOCSY
4 mM lasiocepsin, 90% H2O/10% D2O
0
90% H2O/10% D2O
7
ambient
298
3
2D 1H-15N HSQC
4 mM lasiocepsin, 90% H2O/10% D2O
0
90% H2O/10% D2O
7
ambient
298
4
2D 1H-13C HSQC
4 mM lasiocepsin, 90% H2O/10% D2O
0
90% H2O/10% D2O
7
ambient
298
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Bruker
AVANCE
600
NMR Refinement
Method
Details
Software
DGSA-distance geometry simulated annealing, simulated annealing
?
1
NMR Ensemble Information
Conformer Selection Criteria
structures with the least restraint violations
Conformers Calculated Total Number
100
Conformers Submitted Total Number
48
Representative Model
1 (closest to the average)
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
collection
?
TopSpin
Bruker Biospin
2
processing
?
TopSpin
Bruker Biospin
3
refinement
?
CYANA
Guntert, Mumenthaler and Wuthrich
4
data analysis
?
Sparky
Goddard
5
refinement
?
Amber
Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman