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Organism Classification
Alphafold Collection
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Search Type
PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
2LS9
pdb_00002ls9
10.2210/pdb2ls9/pdb
Download file
FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Ionic Strength
Solvent
pH
Pressure
Temprature (K)
1
2D 1H-1H NOESY
5 mM TRIS, 1 mM pleurocidin, 100 mM [U-2H] SDS, 0.05 % TSP, 90% H2O/10% D2O
5
90% H2O/10% D2O
7.0
ambient
298
2
2D 1H-1H TOCSY
5 mM TRIS, 1 mM pleurocidin, 100 mM [U-2H] SDS, 0.05 % TSP, 90% H2O/10% D2O
5
90% H2O/10% D2O
7.0
ambient
298
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Bruker
AVANCE
500
NMR Refinement
Method
Details
Software
simulated annealing, torsion angle dynamics
?
1
NMR Ensemble Information
Conformer Selection Criteria
structures with the lowest energy
Conformers Calculated Total Number
100
Conformers Submitted Total Number
10
Representative Model
1 (closest to the average)
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
collection
?
TopSpin
Bruker Biospin
2
processing
?
TopSpin
Bruker Biospin
3
structure solution
?
ARIA
Linge, O'Donoghue and Nilges
4
refinement
?
ARIA
Linge, O'Donoghue and Nilges
5
data analysis
?
ProcheckNMR
Laskowski and MacArthur
6
data analysis
?
AQUA
Rullmann, Doreleijers and Kaptein
7
chemical shift assignment
?
Sparky
Goddard
8
peak picking
?
Sparky
Goddard