SOLUTION NMR


NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D 1H-15N HSQC 100 uM sodium azide, 10 mM sodium phosphate, 1 mM EDTA, 7 % D2O, 93 % H2O, 0.5 mM [U-95% 13C; U-95% 15N] M6P/IGF2_receptor, 93% H2O/7% D2O 0.01 93% H2O/7% D2O 5.50 ambient 298.15
2 2D 1H-13C HSQC 100 uM sodium azide, 10 mM sodium phosphate, 1 mM EDTA, 7 % D2O, 93 % H2O, 0.5 mM [U-95% 13C; U-95% 15N] M6P/IGF2_receptor, 93% H2O/7% D2O 0.01 93% H2O/7% D2O 5.50 ambient 298.15
3 3D CBCA(CO)NH 100 uM sodium azide, 10 mM sodium phosphate, 1 mM EDTA, 7 % D2O, 93 % H2O, 0.5 mM [U-95% 13C; U-95% 15N] M6P/IGF2_receptor, 93% H2O/7% D2O 0.01 93% H2O/7% D2O 5.50 ambient 298.15
4 3D C(CO)NH 100 uM sodium azide, 10 mM sodium phosphate, 1 mM EDTA, 7 % D2O, 93 % H2O, 0.5 mM [U-95% 13C; U-95% 15N] M6P/IGF2_receptor, 93% H2O/7% D2O 0.01 93% H2O/7% D2O 5.50 ambient 298.15
5 3D HNCO 100 uM sodium azide, 10 mM sodium phosphate, 1 mM EDTA, 7 % D2O, 93 % H2O, 0.5 mM [U-95% 13C; U-95% 15N] M6P/IGF2_receptor, 93% H2O/7% D2O 0.01 93% H2O/7% D2O 5.50 ambient 298.15
6 3D HNCACB 100 uM sodium azide, 10 mM sodium phosphate, 1 mM EDTA, 7 % D2O, 93 % H2O, 0.5 mM [U-95% 13C; U-95% 15N] M6P/IGF2_receptor, 93% H2O/7% D2O 0.01 93% H2O/7% D2O 5.50 ambient 298.15
7 3D H(CCO)NH 100 uM sodium azide, 10 mM sodium phosphate, 1 mM EDTA, 7 % D2O, 93 % H2O, 0.5 mM [U-95% 13C; U-95% 15N] M6P/IGF2_receptor, 93% H2O/7% D2O 0.01 93% H2O/7% D2O 5.50 ambient 298.15
8 3D 1H-15N NOESY 100 uM sodium azide, 10 mM sodium phosphate, 1 mM EDTA, 7 % D2O, 93 % H2O, 0.5 mM [U-95% 13C; U-95% 15N] M6P/IGF2_receptor, 93% H2O/7% D2O 0.01 93% H2O/7% D2O 5.50 ambient 298.15
9 3D 1H-13C NOESY 100 uM sodium azide, 10 mM sodium phosphate, 1 mM EDTA, 7 % D2O, 93 % H2O, 0.5 mM [U-95% 13C; U-95% 15N] M6P/IGF2_receptor, 93% H2O/7% D2O 0.01 93% H2O/7% D2O 5.50 ambient 298.15
10 3D HNCA 100 uM sodium azide, 10 mM sodium phosphate, 1 mM EDTA, 7 % D2O, 93 % H2O, 0.5 mM [U-95% 13C; U-95% 15N] M6P/IGF2_receptor, 93% H2O/7% D2O 0.01 93% H2O/7% D2O 5.50 ambient 298.15
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
NMR Refinement
Method Details Software
DGSA-distance geometry simulated annealing RECOORD water refinement 1
NMR Ensemble Information
Conformer Selection Criteria STRUCTURES WITH THE LOWEST ENER
Conformers Calculated Total Number 100
Conformers Submitted Total Number 20
Representative Model 1 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 structure solution 1.2 ARIA Linge, O'Donoghue and Nilges
2 refinement 1.2 ARIA Linge, O'Donoghue and Nilges
3 processing ? NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4 data analysis ? TALOS Cornilescu, Delaglio and Bax
5 chemical shift assignment ? PINE Bahrami, Markley, Assadi, and Eghbalnia
6 refinement ? ProcheckNMR Laskowski and MacArthur
7 collection 2.2c VnmrJ Varian
8 chemical shift assignment 2.1 Analysis CCPN
9 refinement 2.1 Analysis CCPN
10 peak picking 2.1 Analysis CCPN
11 data analysis 1.0 CS23D Wishart DS, Arndt D, Berjanskii M, Tang P, Zhou J, Lin G.
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