SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D DQF-COSY 1.5 mM RNA (5'-R(*CP*CP*GP*CP*UP*GP*CP*GP*G)-3'), 100% D2O 0.1 100% D2O 7.2 ambient 313
2 2D 1H-1H NOESY 1.5 mM RNA (5'-R(*CP*CP*GP*CP*UP*GP*CP*GP*G)-3'), 100% D2O 0.1 100% D2O 7.2 ambient 313
3 2D 1H-1H TOCSY 1.5 mM RNA (5'-R(*CP*CP*GP*CP*UP*GP*CP*GP*G)-3'), 100% D2O 0.1 100% D2O 7.2 ambient 313
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
1 Varian INOVA 500
NMR Refinement
Method Details Software
molecular dynamics ? 1
NMR Ensemble Information
Conformer Selection Criteria structures with acceptable covalent geometry
Conformers Calculated Total Number 25
Conformers Submitted Total Number 1
Representative Model 1 (fewest violations)
Computation: NMR Software
# Classification Version Software Name Author
1 geometry optimization 2.1 CYANA Guntert, Mumenthaler and Wuthrich
2 chemical shift assignment 3.111 Sparky Goddard
3 data analysis 3.111 Sparky Goddard
4 peak picking 3.111 Sparky Goddard
5 refinement 11 Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollm
6 structure solution 11 Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollm