SOLUTION NMR


NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 3D_15N-separated_NOESY 0.75 mM [U-100% 13C; U-100% 15N] C6orf130, 93% H2O, 7% D2O 200 93% H2O/7% D2O 6.5 1 298
2 3D_13C-separated_NOESY 0.75 mM [U-100% 13C; U-100% 15N] C6orf130, 93% H2O, 7% D2O 200 93% H2O/7% D2O 6.5 1 298
3 3D_13C-separated_NOESY (AROMATIC) 0.75 mM [U-100% 13C; U-100% 15N] C6orf130, 93% H2O, 7% D2O 200 93% H2O/7% D2O 6.5 1 298
4 3D F1-13C-flitered/F3-13C-edited 1H-13C NOESY aliphatic 0.75 mM [U-100% 13C; U-100% 15N] C6orf130, 93% H2O, 7% D2O 200 93% H2O/7% D2O 6.5 1 298
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
1 Bruker AVANCE II 600
NMR Refinement
Method Details Software
AUTOMATED METHODS WERE USED FOR BACKBONE CHEMICAL SHIFT ASSIGNMENT AND ITERATIVE NOE REFINEMENT. FINAL STRUCTURES WERE OBTAINED BY MOLECULAR DYNAMICS IN EXPLICIT SOLVENT., torsion angle dynamics, AUTOMATED METHODS WERE USED FOR BACKBONE CHEMICAL SHIFT ASSIGNMENT AND ITERATIVE NOE REFINEMENT. FINAL STRUCTURES WERE OBTAINED BY MOLECULAR DYNAMICS IN EXPLICIT SOLVENT STRUCTURES ARE BASED ON A TOTAL OF 2020 NOE CONSTRAINTS (632 INTRA, 416 SEQUENTIAL, 303 MEDIUM, 630 LONG RANGE, and 39 INTERMOLECULAR CONSTRAINTS) AND 211 PHI AND PSI DIHEDRAL ANGLE CONSTRAINTS., STRUCTURES ARE BASED ON A TOTAL OF 2020 NOE CONSTRAINTS (632 INTRA, 416 SEQUENTIAL, 303 MEDIUM, 630 LONG RANGE, and 39 INTERMOLECULAR CONSTRAINTS) AND 211 PHI AND PSI DIHEDRAL ANGLE CONSTRAINTS. 1
NMR Ensemble Information
Conformer Selection Criteria target function
Conformers Calculated Total Number 100
Conformers Submitted Total Number 20
Representative Model 1 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 refinement 2.9.3 Xplor-NIH SCHWIETERS,C.D.,KUSZEWSKI,J.J.,TJANDRA,N.,CLORE,G.M.
2 collection 2.1 TopSpin Bruker
3 processing 2007 NMRPipe Delagio,F. et al.
4 data analysis 1.3 XEASY Eccles, C., Guntert, P., Billeter, M., Wuthrich, K.
5 data analysis 2.1 GARANT C. Bartels
6 structural calculation 2.1 CYANA Guntert, P.
7 refinement ? CYANA ?
Feedback Form
Name
Email
Institute
Feedback