SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D 1H-1H NOESY unknown mM DNA (5'-D(*CP*AP*GP*CP*GP*(3DR)P*GP*TP*AP*TP*AP*AP*GP*C)-3'), unknown mM DNA (5'-D(*GP*CP*TP*TP*AP*(3DR)P*AP*CP*AP*CP*GP*CP*TP*G)-3'), 100% D2O ? 100% D2O 6.8 ambient 298
2 2D 1H-1H COSY unknown mM DNA (5'-D(*CP*AP*GP*CP*GP*(3DR)P*GP*TP*AP*TP*AP*AP*GP*C)-3'), unknown mM DNA (5'-D(*GP*CP*TP*TP*AP*(3DR)P*AP*CP*AP*CP*GP*CP*TP*G)-3'), 100% D2O ? 100% D2O 6.8 ambient 298
3 2D DQF-COSY unknown mM DNA (5'-D(*CP*AP*GP*CP*GP*(3DR)P*GP*TP*AP*TP*AP*AP*GP*C)-3'), unknown mM DNA (5'-D(*GP*CP*TP*TP*AP*(3DR)P*AP*CP*AP*CP*GP*CP*TP*G)-3'), 100% D2O ? 100% D2O 6.8 ambient 298
4 2D 1H-1H TOCSY unknown mM DNA (5'-D(*CP*AP*GP*CP*GP*(3DR)P*GP*TP*AP*TP*AP*AP*GP*C)-3'), unknown mM DNA (5'-D(*GP*CP*TP*TP*AP*(3DR)P*AP*CP*AP*CP*GP*CP*TP*G)-3'), 100% D2O ? 100% D2O 6.8 ambient 298
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
1 Varian INOVA 600
NMR Refinement
Method Details Software
molecular dynamics, DGSA-distance geometry simulated annealing Authors indicate chirality error at DT8 in model 1 due to flexibility of the DNA duplex in solution 1
NMR Ensemble Information
Conformer Selection Criteria structures with the least restraint violations
Conformers Calculated Total Number 20
Conformers Submitted Total Number 4
Representative Model 1 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 geometry optimization 3.1 X-PLOR Brunger
2 refinement 3.1 X-PLOR Brunger