SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D 1H-15N HSQC 0.8 mM [U-15N] Tra2beta1-1, 0.8 mM [U-13C; U-15N] Tra2beta1-2, 0.8 mM RNA (5'-R(*AP*AP*GP*AP*AP*C)-3')-3, 90% H2O/10% D2O 120 90% H2O/10% D2O 5.5 ambient 313
2 2D 1H-13C HSQC 0.8 mM [U-15N] Tra2beta1-1, 0.8 mM [U-13C; U-15N] Tra2beta1-2, 0.8 mM RNA (5'-R(*AP*AP*GP*AP*AP*C)-3')-3, 90% H2O/10% D2O 120 90% H2O/10% D2O 5.5 ambient 313
3 2D 1H-1H NOESY 0.8 mM [U-15N] Tra2beta1-1, 0.8 mM [U-13C; U-15N] Tra2beta1-2, 0.8 mM RNA (5'-R(*AP*AP*GP*AP*AP*C)-3')-3, 90% H2O/10% D2O 120 90% H2O/10% D2O 5.5 ambient 313
4 3D CBCA(CO)NH 0.8 mM [U-15N] Tra2beta1-1, 0.8 mM [U-13C; U-15N] Tra2beta1-2, 0.8 mM RNA (5'-R(*AP*AP*GP*AP*AP*C)-3')-3, 90% H2O/10% D2O 120 90% H2O/10% D2O 5.5 ambient 313
5 3D HNCA 0.8 mM [U-15N] Tra2beta1-1, 0.8 mM [U-13C; U-15N] Tra2beta1-2, 0.8 mM RNA (5'-R(*AP*AP*GP*AP*AP*C)-3')-3, 90% H2O/10% D2O 120 90% H2O/10% D2O 5.5 ambient 313
6 2D 1H-1H TOCSY 0.8 mM [U-15N] Tra2beta1-1, 0.8 mM [U-13C; U-15N] Tra2beta1-2, 0.8 mM RNA (5'-R(*AP*AP*GP*AP*AP*C)-3')-3, 90% H2O/10% D2O 120 90% H2O/10% D2O 5.5 ambient 313
7 3D HCCH-TOCSY 0.8 mM [U-15N] Tra2beta1-1, 0.8 mM [U-13C; U-15N] Tra2beta1-2, 0.8 mM RNA (5'-R(*AP*AP*GP*AP*AP*C)-3')-3, 90% H2O/10% D2O 120 90% H2O/10% D2O 5.5 ambient 313
8 3D 1H-15N NOESY 0.8 mM [U-15N] Tra2beta1-1, 0.8 mM [U-13C; U-15N] Tra2beta1-2, 0.8 mM RNA (5'-R(*AP*AP*GP*AP*AP*C)-3')-3, 90% H2O/10% D2O 120 90% H2O/10% D2O 5.5 ambient 313
9 3D 1H-13C NOESY 0.8 mM [U-15N] Tra2beta1-1, 0.8 mM [U-13C; U-15N] Tra2beta1-2, 0.8 mM RNA (5'-R(*AP*AP*GP*AP*AP*C)-3')-3, 90% H2O/10% D2O 120 90% H2O/10% D2O 5.5 ambient 313
10 3D HNCACB 0.8 mM [U-15N] Tra2beta1-1, 0.8 mM [U-13C; U-15N] Tra2beta1-2, 0.8 mM RNA (5'-R(*AP*AP*GP*AP*AP*C)-3')-3, 90% H2O/10% D2O 120 90% H2O/10% D2O 5.5 ambient 313
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
NMR Refinement
Method Details Software
simulated annealing ? 1
NMR Ensemble Information
Conformer Selection Criteria structures with the lowest energy
Conformers Calculated Total Number 50
Conformers Submitted Total Number 12
Representative Model 1 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 refinement 8 Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm
2 structure solution 2.0 CYANA Guntert, Mumenthaler and Wuthrich
3 chemical shift assignment 3.113 Sparky Goddard