SOLUTION NMR


NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D 1H-15N HSQC 1.129 MM [U-100% 13C; U-100% 15N] LAMIN-B1 PROTEIN, 90% H2O/10% D2O 20mM NH4OAc, 5mM CACL2, 200mM NACL 90% H2O/10% D2O 4.5 AMBIENT 298
2 2D 1H-13C HSQC 1.129 MM [U-100% 13C; U-100% 15N] LAMIN-B1 PROTEIN, 90% H2O/10% D2O 90% H2O/10% D2O
3 3D HNCACB 1.129 MM [U-100% 13C; U-100% 15N] LAMIN-B1 PROTEIN, 90% H2O/10% D2O 90% H2O/10% D2O
4 3D CBCA(CO)NH 1.129 MM [U-100% 13C; U-100% 15N] LAMIN-B1 PROTEIN, 90% H2O/10% D2O 90% H2O/10% D2O
5 3D HBHA(CO)NH 1.129 MM [U-100% 13C; U-100% 15N] LAMIN-B1 PROTEIN, 90% H2O/10% D2O 90% H2O/10% D2O
6 3D HNCO 1.129 MM [U-100% 13C; U-100% 15N] LAMIN-B1 PROTEIN, 90% H2O/10% D2O 90% H2O/10% D2O
7 3D HNHA 1.129 MM [U-100% 13C; U-100% 15N] LAMIN-B1 PROTEIN, 90% H2O/10% D2O 90% H2O/10% D2O
8 3D HCCH-TOCSY 1.129 MM [U-100% 13C; U-100% 15N] LAMIN-B1 PROTEIN, 90% H2O/10% D2O 90% H2O/10% D2O
9 3D 1H-15N NOESY 1.129 MM [U-100% 13C; U-100% 15N] LAMIN-B1 PROTEIN, 90% H2O/10% D2O 90% H2O/10% D2O
10 3D 1H-13C NOESY 1.129 MM [U-100% 13C; U-100% 15N] LAMIN-B1 PROTEIN, 90% H2O/10% D2O 90% H2O/10% D2O
11 2D HNOE 1.129 MM [U-100% 13C; U-100% 15N] LAMIN-B1 PROTEIN, 90% H2O/10% D2O 90% H2O/10% D2O
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
NMR Refinement
Method Details Software
simulated annealing FINAL STRUCTURE QUALITY FACTORS DETERMINED USING PSVS SOFTWARE: ORDERED RESIDUES ARE DEFINED AS:15A-32A,34A-37A,42A-47A,53A-72A,75A-79A,85A-91A,101A-106A, 110A-116A.(A) RMSD(ORDERED RESIDUES):BACKBONE ATOMS: 0.7A; ALL ATOMS: 1.0A.(B) RAMACHANDRAN STATISTICS FOR ALL ORDERED RESIDUES: MOST FAVOURED REGIONS: 83.1% ADDITIONALLY ALLOWED REGIONS:16.9% (C) PROCHECK SCORES FOR ALL ORDERED RESIDUES (RAW/Z): PHI-PSI -0.76/-2.68, ALL: -0.42/-2.48 (D) MOLPROBITY CLASH SCORE (RAW/Z): 20.38/-1.97. (E) RPF SCORES FOR GOODNESS OF FIT TO NOESY DATA: RECALL:0.962 PRECISION: 0.919 F-MEASURE: 0.94 DP-SCORE 0.794. 1
NMR Ensemble Information
Conformer Selection Criteria structures with the lowest energy
Conformers Calculated Total Number 100
Conformers Submitted Total Number 20
Representative Model 1 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 refinement 2.0.6 CNS BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ
2 chemical shift assignment 2.1 AutoAssign Zimmerman, Moseley, Kulikowski and Montelione
3 chemical shift assignment ? AVS Moseley and Montelione
4 processing 2008 NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5 peak picking 2.3 Sparky Goddard
6 structure solution 2.2.1 AutoStructure Huang, Tejero, Powers and Montelione
7 geometry optimization 2.1 CYANA Guntert, Mumenthaler and Wuthrich
8 collection 2.1 TopSpin Bruker Biospin
9 collection 2.1 VnmrJ Varian
10 data analysis 2.3 Sparky Goddard
11 structure calculation 2.1 CYANA Guntert, Mumenthaler and Wuthrich
Feedback Form
Name
Email
Institute
Feedback