SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 3D HNHA 1.8mM [U-100% 13C; U-100% 15N] PEPTIDYL-PROLYL CIS/TRANS ISOMERASE, 50mM sodium phosphate, 50mM sodium chloride, 0.02% sodium azide, 90% H2O/10% D2O 0.2 90% H2O/10% D2O 5.0 AMBIENT 283
2 3D_13C- SEPARATED_ NOESY 1.8mM [U-100% 13C; U-100% 15N] PEPTIDYL-PROLYL CIS/TRANS ISOMERASE, 50mM sodium phosphate, 50mM sodium chloride, 0.02% sodium azide, 90% H2O/10% D2O 0.2 90% H2O/10% D2O 5.0 AMBIENT 283
3 3D_15N- SEPARATED_ NOESY 1.8mM [U-100% 13C; U-100% 15N] PEPTIDYL-PROLYL CIS/TRANS ISOMERASE, 50mM sodium phosphate, 50mM sodium chloride, 0.02% sodium azide, 90% H2O/10% D2O 0.2 90% H2O/10% D2O 5.0 AMBIENT 283
4 2D 1H-15N HSQC 1.8mM [U-100% 13C; U-100% 15N] PEPTIDYL-PROLYL CIS/TRANS ISOMERASE, 50mM sodium phosphate, 50mM sodium chloride, 0.02% sodium azide, 90% H2O/10% D2O 0.2 90% H2O/10% D2O 5.0 AMBIENT 283
5 3D HNCACB 1.8mM [U-100% 13C; U-100% 15N] PEPTIDYL-PROLYL CIS/TRANS ISOMERASE, 50mM sodium phosphate, 50mM sodium chloride, 0.02% sodium azide, 90% H2O/10% D2O 0.2 90% H2O/10% D2O 5.0 AMBIENT 283
6 3D HN(COCA)CB 1.8mM [U-100% 13C; U-100% 15N] PEPTIDYL-PROLYL CIS/TRANS ISOMERASE, 50mM sodium phosphate, 50mM sodium chloride, 0.02% sodium azide, 90% H2O/10% D2O 0.2 90% H2O/10% D2O 5.0 AMBIENT 283
7 3D HCCH-COSY 1.8mM [U-100% 13C; U-100% 15N] PEPTIDYL-PROLYL CIS/TRANS ISOMERASE, 50mM sodium phosphate, 50mM sodium chloride, 0.02% sodium azide, 90% H2O/10% D2O 0.2 90% H2O/10% D2O 5.0 AMBIENT 283
8 3D HCCH-TOCSY 1.8mM [U-100% 13C; U-100% 15N] PEPTIDYL-PROLYL CIS/TRANS ISOMERASE, 50mM sodium phosphate, 50mM sodium chloride, 0.02% sodium azide, 90% H2O/10% D2O 0.2 90% H2O/10% D2O 5.0 AMBIENT 283
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
1 Varian INOVA 500
NMR Refinement
Method Details Software
torsion angle dynamics ENERGY MINIMISASTION SUBJECT TO NMR CONSTRAINTS 1
NMR Ensemble Information
Conformer Selection Criteria structures with the lowest energy
Conformers Calculated Total Number 100
Conformers Submitted Total Number 20
Representative Model 1 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 structure solution 2.1 CYANA Guntert, Mumenthaler and Wuthrich
2 processing ? NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3 chemical shift assignment 3 Sparky Goddard
4 data analysis 3 Sparky Goddard
5 peak picking 3 Sparky Goddard
6 collection ? VNMR Varian
7 dihedral angle ? TALOS Cornilescu, Delaglio and Bax
8 refinement 9 Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, Koll
9 energy minimisation 9 Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, Koll