SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 3D HNCO 0.5 mM [U-99% 13C, U-99% 15N] hTRAF6, 50 mM phosphate, 150 mM NaCl, pH 7.5, 90% H2O, 10% D2O 0.2 90% H2O/10% D2O 7.5 ambient 303
2 3D HNCA 0.5 mM [U-99% 13C, U-99% 15N] hTRAF6, 50 mM phosphate, 150 mM NaCl, pH 7.5, 90% H2O, 10% D2O 0.2 90% H2O/10% D2O 7.5 ambient 303
3 3D HNCACB 0.5 mM [U-99% 13C, U-99% 15N] hTRAF6, 50 mM phosphate, 150 mM NaCl, pH 7.5, 90% H2O, 10% D2O 0.2 90% H2O/10% D2O 7.5 ambient 303
4 3D HNHA 0.5 mM [U-99% 13C, U-99% 15N] hTRAF6, 50 mM phosphate, 150 mM NaCl, pH 7.5, 90% H2O, 10% D2O 0.2 90% H2O/10% D2O 7.5 ambient 303
5 3D HNHB 0.5 mM [U-99% 13C, U-99% 15N] hTRAF6, 50 mM phosphate, 150 mM NaCl, pH 7.5, 90% H2O, 10% D2O 0.2 90% H2O/10% D2O 7.5 ambient 303
6 3D HCCH-TOCSY 0.5 mM [U-99% 13C, U-99% 15N] hTRAF6, 50 mM phosphate, 150 mM NaCl, pH 7.5, 90% H2O, 10% D2O 0.2 90% H2O/10% D2O 7.5 ambient 303
7 3D 1H-15N NOESY 0.5 mM [U-99% 13C, U-99% 15N] hTRAF6, 50 mM phosphate, 150 mM NaCl, pH 7.5, 90% H2O, 10% D2O 0.2 90% H2O/10% D2O 7.5 ambient 303
8 3D 1H-13C NOESY 0.5 mM [U-99% 13C, U-99% 15N] hTRAF6, 50 mM phosphate, 150 mM NaCl, pH 7.5, 90% H2O, 10% D2O 0.2 90% H2O/10% D2O 7.5 ambient 303
9 2D 1H-13C HSQC 0.5 mM [U-99% 13C, U-99% 15N] hTRAF6, 50 mM phosphate, 150 mM NaCl, pH 7.5, 90% H2O, 10% D2O 0.2 90% H2O/10% D2O 7.5 ambient 303
10 2D 1H-15N HSQC 0.5 mM [U-99% 13C, U-99% 15N] hTRAF6, 50 mM phosphate, 150 mM NaCl, pH 7.5, 90% H2O, 10% D2O 0.2 90% H2O/10% D2O 7.5 ambient 303
11 3D HACA(CO)CANHh 0.5 mM [U-99% 13C, U-99% 15N] hTRAF6, 50 mM phosphate, 150 mM NaCl, pH 7.5, 90% H2O, 10% D2O 0.2 90% H2O/10% D2O 7.5 ambient 303
12 3D H(CC)-TOCSY-(CO)NNH 0.5 mM [U-99% 13C, U-99% 15N] hTRAF6, 50 mM phosphate, 150 mM NaCl, pH 7.5, 90% H2O, 10% D2O 0.2 90% H2O/10% D2O 7.5 ambient 303
13 3D (H)CCTOCSY(CO)NNH 0.5 mM [U-99% 13C, U-99% 15N] hTRAF6, 50 mM phosphate, 150 mM NaCl, pH 7.5, 90% H2O, 10% D2O 0.2 90% H2O/10% D2O 7.5 ambient 303
14 2D (HB)CB(CGCD)HD 0.5 mM [U-99% 13C, U-99% 15N] hTRAF6, 50 mM phosphate, 150 mM NaCl, pH 7.5, 90% H2O, 10% D2O 0.2 90% H2O/10% D2O 7.5 ambient 303
15 2D (HB)CB(CGCDCE)HE 0.5 mM [U-99% 13C, U-99% 15N] hTRAF6, 50 mM phosphate, 150 mM NaCl, pH 7.5, 90% H2O, 10% D2O 0.2 90% H2O/10% D2O 7.5 ambient 303
16 3D HNN(CO,CA) 0.5 mM [U-99% 13C, U-99% 15N] hTRAF6, 50 mM phosphate, 150 mM NaCl, pH 7.5, 90% H2O, 10% D2O 0.2 90% H2O/10% D2O 7.5 ambient 303
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
NMR Refinement
Method Details Software
torsion angle dynamics, simulated annealing Cyana's internal protocol and refinement of Cyana's structures in explicit solvent using XPLOR-NIH 1
NMR Ensemble Information
Conformer Selection Criteria all calculated structures submitted
Conformers Calculated Total Number 50
Conformers Submitted Total Number 50
Representative Model 1 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 processing 2.5 NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2 structure solution 2.1 CYANA Guntert, Mumenthaler and Wuthrich
3 structure solution 6.5 NMRView Johnson
4 data analysis 3.5.4 ProcheckNMR Laskowski and MacArthur
5 refinement 2.15 X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore
6 structure solution 2.15 X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore
7 collection 2.1 VnmrJ Varian