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PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
2C9F
pdb_00002c9f
10.2210/pdb2c9f/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
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Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
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Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
ELECTRON MICROSCOPY
Sample
HUMAN ADENOVIRUS TYPE 3 ENTIRE DODECAHEDRAL PARTICLE
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
?
Cryogen Name
ETHANE
Sample Vitrification Details
LIQUID ETHANE
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
1849
Reported Resolution (Å)
16.5
Resolution Method
?
Other Details
TO RECONSTITUTE THE ENTIRE DODECAHEDRON, YOU MUST APPLY THE 12 MATRICES TO THE ENTIRE PENTAMER.
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
ID
1
Refinement Space
RECIPROCAL
Refinement Protocol
RIGID BODY FIT
Refinement Target
RFACTOR, CORRELATION COEFFICIENT
Overall B Value
?
Fitting Procedure
?
Details
METHOD--RIGID BODY REFINEMENT PROTOCOL--X-RAY
Data Acquisition
Detector Type
KODAK SO-163 FILM
Electron Dose (electrons/Å
2
)
?
Imaging Experiment
Date of Experiment
?
Temprature (Kelvin)
Microscope Model
FEI/PHILIPS CM200T
Minimum Defocus (nm)
1000
Maximum Defocus (nm)
2500
Minimum Tilt Angle (degrees)
0
Maximum Tilt Angle (degrees)
0
Nominal CS
2
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
.
Nominal Magnification
38000
Calibrated Magnification
40930
Source
LAB6
Acceleration Voltage (kV)
200
Imaging Details
?
Imaging Experiment
Task
Software Package
Version
RECONSTRUCTION
Bsoft
?
RECONSTRUCTION
SPIDER
?
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details
?
AMPLITUDE, PHASE