| MOLECULAR DYNAMICS, ENERGY MINIMIZATION |
STRUCTURE CALCULATION: MOLECULAR DYNAMICS AND ENERGY MINIMIZATION USING X-PLOR CONSTRAINTS (PER STRAND): TOTAL 70 DISTANCE CONSTRAINTS (ABOUT 12/NUCLEOTIDE) 43 FROM INTRANUCLEOTIDE NOES 6 FROM SEQUENTIAL INTERNUCLEOTIDE NOES 21 FROM NON-SEQUENTIAL INTERNUCLEOTIDE NOES 15 FROM HYDROGEN BONDS DIHEDRAL ANGLE CONSTRAINTS 10 BACKBONE AND SUGAR RING TORSION ANGLES CONSTRAINTS TO MAKE CYTOSINE BASE PAIRS PLANAR 4-FOLD SYMMETRY CONSTRAINTS (AS 3 SETS OF PAIRWISE NON-CRYSTALLOGRAPHIC SYMMETRY CONSTRAINTS) |
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