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Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
1YXR
pdb_00001yxr
10.2210/pdb1yxr/pdb
Download file
FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Ionic Strength
Solvent
pH
Pressure
Temprature (K)
1
3D_13C-separated_NOESY
Uniform labeling with 15N and 13C.
50 mM NaCl
50 mM NaCl, 20 mM sodium phosphate, 10% D2O
5.5
ambient
298
2
3D_15N-separated_NOESY
Uniform labeling with 15N and 13C.
50 mM NaCl
50 mM NaCl, 20 mM sodium phosphate, 10% D2O
5.5
ambient
298
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Varian
INOVA
600
NMR Refinement
Method
Details
Software
automated NOE assignment using CYANA and torsion angle dynamics for structure calculations
The structures are based on 1432 NOE derived distance constraints, 150 dihedral angle constraints (generated by TALOS) and 114 distance constraints from hydrogen bonds
1
NMR Ensemble Information
Conformer Selection Criteria
all calculated structures submitted
Conformers Calculated Total Number
20
Conformers Submitted Total Number
20
Representative Model
18 (lowest energy)
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
processing
97
Felix
Accelyrs, San Diego
2
data analysis
3.110
Sparky
TD Goddard and DG Kneller
3
structure solution
2.0
CYANA
P Guntert
4
refinement
1.1
CNS
AT Brunger, et al.