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Protein Name
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Summary
Structure Feature
Experiment
Ligands & Environment
1YWL
pdb_00001ywl
10.2210/pdb1ywl/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Ionic Strength
Solvent
pH
Pressure
Temprature (K)
1
3D_15N-separated_NOESY
5% D2O, 0.02% NaN3, 10mM DTT, 5mM CaCl2, 100mM NaCl, 20mM MES, 5 % D20, 95 % H20
100 mM NaCl, 5 mM CaCl2
5 % D20, 95 % H20
6.5
1
293
2
3D_13C-separated_NOESY
5% D2O, 0.02% NaN3, 10mM DTT, 5mM CaCl2, 100mM NaCl, 20mM MES, 5 % D20, 95 % H20
100 mM NaCl, 5 mM CaCl2
5 % D20, 95 % H20
6.5
1
293
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
NMR Refinement
Method
Details
Software
torsion angle dynamics simulated annealing
The structures are based on a total of 912 conformationally-restricting noe-derived distance restraints, 216 dihedral restraints and 54 hydrogen bond restraints.
1
NMR Ensemble Information
Conformer Selection Criteria
Structures with lowest energy
Conformers Calculated Total Number
56
Conformers Submitted Total Number
10
Representative Model
1 (lowest energy)
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
refinement
1.5
DYANA
Guentert, et al
2
structure solution
2.0.0
AutoStructure
Huang
3
data analysis
1.14
AutoAssign
Moseley, et al
4
processing
2.1
NMRPipe
Delaglio, et al
5
collection
6.1B
VNMR
Varian
6
collection
3.5
XwinNMR
Bruker
7
structure solution
4.01
PdbStat
Tejero and Montelione
8
structure solution
3.2
HYPER
Tejero and Montelione
9
structure solution
2.1
TALOS
Cornilescu, et al
10
data analysis
5.0
SPINS
Baran
11
refinement
1.0
PSVS
Bhattacharya
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