SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D NOESY 1-2 mM wild type reduced spinach plastocyanin, 50mM sodium phosphate buffer 50 mM sodium phosphate 90% H2O/10% D2O 7.5 ambient 293
2 2D TOCSY 1-2 mM wild type reduced spinach plastocyanin, 50mM sodium phosphate buffer 50 mM sodium phosphate 90% H2O/10% D2O 7.5 ambient 293
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
NMR Refinement
Method Details Software
torsion angle dynamics + restrained energy minimization + restrained molecular dynamics The structure was calculated using dipolar (NOESY) derived constraints supplemented with phi and psi dihedral angle constraints as well as with hydrogen bond constraints. The mean structure of the DYANA family was initially subjected to restrained energy minimization in vacuo and subsequently to restrained molecular dynamics in explicit water medium. For further experimental details please refer to the publication. 1
NMR Ensemble Information
Conformer Selection Criteria ?
Conformers Calculated Total Number ?
Conformers Submitted Total Number 1
Representative Model 1 (the structure was obtained subjecting the mean structure of the dyana family to the restrained energy minimization and subsequent restrained molecular dynamics)
Computation: NMR Software
# Classification Version Software Name Author
1 collection 1.3 XwinNMR Bruker
2 structure solution 1.5 DYANA Guntert, P., Mumenthaler, C., and Wuthrich, K.
3 refinement 6.0 Amber Case, D. A., Pearlman, D. A., Caldwell, J. W., Cheatham III, T. E., Ross, W. S., Simmerling, C. L., Darden, T. A., Merz, K. M., Stanton, R. V., Cheng, A. L., Vincent, J. J., Crowley, M., Tsui, V., Radmer, R. J., Duan, Y., Pitera, J., Massova, I., Seibel, G. L., Singh, U. C., Weiner, P. K., and Kollman, P. A.
4 data analysis 1.3 XEASY Bartels, C., Xia, T., Billeter, M., Guntert, P., and Wuthrich, K.