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PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
1YL8
pdb_00001yl8
10.2210/pdb1yl8/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Ionic Strength
Solvent
pH
Pressure
Temprature (K)
1
2D TOCSY
2-3mM [Tyr3]Octreotate; DMSO
?
DMSO-d6
?
ambient
298
2
2D NOESY
2-3mM [Tyr3]Octreotate; DMSO
?
DMSO-d6
?
ambient
298
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Bruker
DPX
400
NMR Refinement
Method
Details
Software
simulated annealing, torsion angle dynamics
The calculated structures have been calculated using 154 NOE-derived constraints extracted from NOESY spectra acquired using 400 ms of mixing time.
1
NMR Ensemble Information
Conformer Selection Criteria
target function
Conformers Calculated Total Number
400
Conformers Submitted Total Number
21
Representative Model
1 (minimized average structure)
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
collection
2.6
XwinNMR
Bruker
2
data analysis
1.3
XEASY
Eccles, C.; Guntert, P.; Billeter, M.; Wuthrich, K.
3
structure solution
1.5
DYANA
Guntert, P.; Mumenthaler, C.; Wuthrich, K.
4
refinement
5
Amber
Pearlman, D.A.; Case, D.A.; Caldwell, J.W.; Ross, W.S.; Cheatham, T.E.; Ferguson, D.M.; Seibel, G.L.; Singh, U.C.; Weiner, P.K.; Kollman, P.A.