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PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
1UPN
pdb_00001upn
10.2210/pdb1upn/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
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MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
ELECTRON MICROSCOPY
Sample
ECHOVIRUS TYPE 12
Specimen Preperation
Sample Aggregation State
PARTICLE
Vitrification Instrument
?
Cryogen Name
ETHANE
Sample Vitrification Details
LIQUID ETHANE
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
903
Reported Resolution (Å)
16
Resolution Method
FSC 0.5 CUT-OFF
Other Details
MAP BROUGHT TO P23 CRYSTAL WITH UNIT CELL DIMENSIONS OF 599.375 599.375 599.375 90.00 90.00 90.00. MODEL FOR EV11 DOCKED ONTO EV12 EM DENSITY. 0.5 A GAP BETWEEN CD55 DOMAIN 3 AND DOMAIN 4 WAS INTRODUCED BY RIGID-BODY REFINEMENT OF DOMAIN 4 KEEPING 3 FIXED
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
ID
1
Refinement Space
REAL
Refinement Protocol
OTHER
Refinement Target
Cross-correlation coefficient
Overall B Value
?
Fitting Procedure
?
Details
REFINEMENT PROTOCOL--X-RAY
Data Acquisition
Detector Type
KODAK SO-163 FILM
Electron Dose (electrons/Å
2
)
?
Imaging Experiment
Date of Experiment
2002-07-15
Temprature (Kelvin)
Microscope Model
JEOL 2000EXII
Minimum Defocus (nm)
300
Maximum Defocus (nm)
2000
Minimum Tilt Angle (degrees)
?
Maximum Tilt Angle (degrees)
?
Nominal CS
3.4
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
.
Nominal Magnification
30000
Calibrated Magnification
29200
Source
LAB6
Acceleration Voltage (kV)
120
Imaging Details
PARTICLES SELECTED WITH X3D
Image Processing
CTF Correction Type
CTF Correction Details
Number of Particles Selected
Particle Selection Details