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Protein Name
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Structure Feature
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Ligands & Environment
1SSV
pdb_00001ssv
10.2210/pdb1ssv/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Ionic Strength
Solvent
pH
Pressure
Temprature (K)
1
2D NOESY
1 mM DNA
400 mM NaCl, 40 mM phosphate
100% D2O
7
ambient
308
2
DQF-COSY
1 mM DNA
400 mM NaCl, 40 mM phosphate
100% D2O
7
ambient
308
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
NMR Refinement
Method
Details
Software
Restrained Molecular Dynamics
Structure is based on a total of 316 NOE distance restraints, 90 torsion angle restraints and six distance restraints were used to represent each W-C base-pair
1
NMR Ensemble Information
Conformer Selection Criteria
Structures with lowest energy
Conformers Calculated Total Number
45
Conformers Submitted Total Number
15
Representative Model
1 (closest to the average)
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
data analysis
98
Felix
MSI
2
refinement
3.85
X-PLOR
Brunger, Tjandra
3
iterative matrix relaxation
96
BIRDER
Zhu, Reid