SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D NOESY 2mM duplex, 100mM NaCl, 90% H2O, 10% D2O or 100% D2O 100 mM NaCl 90% H2O, 10% D2O or 100% D2O 7.0 1 278
2 DQF-COSY 2mM duplex, 100mM NaCl, 90% H2O, 10% D2O or 100% D2O 100 mM NaCl 90% H2O, 10% D2O or 100% D2O 7.0 1 278
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
1 Bruker DMX 600
NMR Refinement
Method Details Software
relaxation matrix restrained molecular dynamics THE STRUCTURES ARE BASED ON A TOTAL OF 380 NOE-DERIVED DISTANCE CONSTRAINTS OBTAINED FROM A COMPLETE RELAXATION MATRIX REFINEMENT. THE STRUCTURES WERE CALCULATED BY USING RESTRAINED MOLECULAR DYNAMICS WITH EXPLICIT SOLVENT, AND APPLYING THE PARTICLE MESH EWALD METHOD 1
NMR Ensemble Information
Conformer Selection Criteria all calculated structures submitted
Conformers Calculated Total Number 10
Conformers Submitted Total Number 10
Representative Model 3 (lowest energy)
Computation: NMR Software
# Classification Version Software Name Author
1 structure solution 5.1 DYANA Gunter P., et al.
2 iterative matrix relaxation 5.2 MARDIGRAS James, T.L., et al.
3 refinement 5.0 Amber Kollman P., et al.
4 collection 1.3 XwinNMR BRUKER
5 data analysis 1.0 XEASY Bartels, et al.
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