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Structure Feature
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Ligands & Environment
1S9N
pdb_00001s9n
10.2210/pdb1s9n/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Ionic Strength
Solvent
pH
Pressure
Temprature (K)
1
2D NOESY
1mM DNA, 10mM Phosphate pH 7.0, 200mM NaCl, 1mM EDTA
200mM
?
7.0
1
298
2
DQF-COSY
1mM DNA, 10mM Phosphate pH 7.0, 200mM NaCl, 1mM EDTA
200mM
?
7.0
1
298
3
H-P HETCOR
1mM DNA, 10mM Phosphate pH 7.0, 200mM NaCl, 1mM EDTA
200mM
?
7.0
1
298
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
NMR Refinement
Method
Details
Software
distance geometry, simulated annealing, molecular dynamics, relaxation matrix
The structures are based on a total of 715 distance restraints (560 are NOE-derived, 52 based on hydrogen bonding, 103 repulsive) and 178 dihedral angle restraints (106 backbone and 72 chiral).
1
NMR Ensemble Information
Conformer Selection Criteria
back calculated data agree with experimental NOESY spectrum
Conformers Calculated Total Number
40
Conformers Submitted Total Number
26
Representative Model
1 (?)
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
collection
1
XwinNMR
Bruker
2
processing
1
Felix
Hare
3
data analysis
1
Felix
Hare
4
structure solution
1
DGII
Biosym
5
structure solution
1
Discover
Biosym
6
iterative matrix relaxation
1
BIRDER
Zu
7
refinement
1
Discover
Biosym