| simulated annealing |
TERMS IN THE TARGET FUNCTION USED FOR SIMULATED ANNEALING:
NOE (SUM AVERAGING) AND TORSION ANGLE RESTRAINTS
3JHNALPHA COUPLING CONSTANT RESTRAINTS
AND THREE_BOND DEUTERIUMCALPHA(ND) ISOTOPE
RESTRAINTS (GARRETT ET AL
J. MAGN. RESON. B104, 99-103 (1994)).
13CALPHA AND 13CBETA CHEMISCAL SHIFT RESTRAINTS
(KUSZEWSKI ET AL J> MAGN RESON B106, 92-96 (1995))
TERM FOR THE RADIUS OF GYRATION (KUSZEWSKI J, GRONENB
CLORE, GM J AM CHEM SOC 121, 2337-2338 (1999))
TORSION ANGLE DATABASE POTENTIAL (KUSZEWSKI J, GRONEN
CLORE GM. PROTEIN SCI 5, 1067-1080 (1996); J. MAGN
125, 171-177 (1997)).
COVALENT GEOMETRY RESTRAINTS (BONDS, ANGLES, IMPROPER
QUARTIC VAN DER WAALS REPULSION TERM (NILGES. M,
GRONENBORN, A.M., BRUNGER, A.T., CLORE, G.M. (1988)
PROTEIN ENG. 2, 27-38). |
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