Home
About
Browse
Covid-19
Organism Classification
Alphafold Collection
Indian Data
Contact
Search Type
PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Summary
Structure Feature
Experiment
Ligands & Environment
1LDZ
pdb_00001ldz
10.2210/pdb1ldz/pdb
Download file
FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Ionic Strength
Solvent
pH
Pressure
Temprature (K)
1
NOESY
H2O/D2O
0.1 M
5.5
1
298
2
CPMG-NOESY
H2O/D2O
0.1 M
5.5
1
298
3
BD-NOESY
H2O/D2O
0.1 M
5.5
1
298
4
CBD-NOESY
H2O/D2O
0.1 M
5.5
1
298
5
NOESY-HSQC
H2O/D2O
0.1 M
5.5
1
298
6
CBD-NOESY-HSQC
H2O/D2O
0.1 M
5.5
1
298
7
HMQC-NOESY-HSQC
H2O/D2O
0.1 M
5.5
1
298
8
HCCH-E.COSY
H2O/D2O
0.1 M
5.5
1
298
9
DIRECTED HCC-TOCSY-CCH-E.COSY
H2O/D2O
0.1 M
5.5
1
298
10
SPIN-ECHO DIFFERENCE CT-HCCH-COSY
H2O/D2O
0.1 M
5.5
1
298
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
NMR Refinement
Method
Details
Software
SIMULATED ANNEALING FROM RANDOM TORSION ANGLES
A COMPLETE SET OF REFINEMENT MACROS, ALONG WITH ASSOCIATED FILES, IS AVAILABLE UPON REQUEST TO THE AUTHORS.
1
NMR Ensemble Information
Conformer Selection Criteria
NO NOE VIOLATIONS GREATER THAN 0.3 A, NO DIHEDRAL VIOLATIONS GREATER THAN 3 DEGREES, GOOD STEREOCHEMICAL QUALITY, TOTAL ENERGY LESS THAN -120 KCAL/MOL, NOE PSEUDOENERGY LESS THAN 4 KCAL/ MOL
Conformers Calculated Total Number
25
Conformers Submitted Total Number
25
Representative Model
1 (?)
Computation: NMR Software
#
Classification
Version
Software Name
Author
1
refinement
3.1
X-PLOR
BRUNGER
2
structure solution
3.1
X-PLOR
?