SOLUTION NMR

NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 Noesy 130 OD260 of double stranded oligodeoxynucleotide are dissolved in 0.5 ml nmr buffer containing 99.996% D2O. 10mM phosphate buffer The buffer is 10mM sodium phosphate pH 6.9 containing 100mM NaCl and 0.05mM Na2EDTA. 6.9 1 293
2 DQF-COSY 130 OD260 of double stranded oligodeoxynucleotide are dissolved in 0.5 ml nmr buffer containing 99.996% D2O. 10mM phosphate buffer The buffer is 10mM sodium phosphate pH 6.9 containing 100mM NaCl and 0.05mM Na2EDTA. 6.9 1 293
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
1 Bruker DRX 500
NMR Refinement
Method Details Software
simulated annealing, molecular dynamics, matrix relaxation ? 1
NMR Ensemble Information
Conformer Selection Criteria back calculated data agree with experimental NOESY spectrum
Conformers Calculated Total Number 50
Conformers Submitted Total Number 1
Representative Model 1 (minimized average structure)
Computation: NMR Software
# Classification Version Software Name Author
1 collection 97 Felix Molecular simulations
2 refinement 3.0 MARDIGRAS James, TL
3 iterative matrix relaxation 3.85 X-PLOR Brunger
4 data analysis 4.0 CORMA James