SOLUTION NMR


NMR Experiment
Experiment Type Sample Contents Ionic Strength Solvent pH Pressure Temprature (K)
1 2D NOESY 3 mM decoding site RNA, 13C/15N, 10 mM phosphate pH 6.3, 90% H20/10% D20, 100% D20 10 mM 90% H2O/10% D20; 100% D2O 6.3 1 298
2 3D_13C-separated_NOESY 3 mM decoding site RNA, 13C/15N, 10 mM phosphate pH 6.3, 90% H20/10% D20, 100% D20 10 mM 90% H2O/10% D20; 100% D2O 6.3 1 298
3 3D_15N-separated_NOESY 3 mM decoding site RNA, 13C/15N, 10 mM phosphate pH 6.3, 90% H20/10% D20, 100% D20 10 mM 90% H2O/10% D20; 100% D2O 6.3 1 298
4 4D_13C-separated_NOESY 3 mM decoding site RNA, 13C/15N, 10 mM phosphate pH 6.3, 90% H20/10% D20, 100% D20 10 mM 90% H2O/10% D20; 100% D2O 6.3 1 298
5 DQF-COSY 3 mM decoding site RNA, 13C/15N, 10 mM phosphate pH 6.3, 90% H20/10% D20, 100% D20 10 mM 90% H2O/10% D20; 100% D2O 6.3 1 298
NMR Spectrometer Information
Spectrometer Manufacturer Model Field Strength
NMR Refinement
Method Details Software
simulated annealing molecular dynamics 682 NOEs, 129 dihedral constraints, 36 Hydrogen bonds 1
NMR Ensemble Information
Conformer Selection Criteria structures with the least restraint violations,structures with the lowest energy
Conformers Calculated Total Number 100
Conformers Submitted Total Number 25
Representative Model 12 (?)
Computation: NMR Software
# Classification Version Software Name Author
1 refinement 3.83 X-PLOR Brunger
2 structure solution 3.83 X-PLOR Brunger
3 processing 6.1 VNMR ?
4 processing 6.1 Felix ?
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