Study Info
INDA Accessions: INRP000563
INSDC Accessions: PRJEB107278, ERP188300
- Title: Hi-C sequencing of fungal sample Apiospora malaysiana
- Data Type : Whole Genome Sequencing
- Descriptive Title: Hi-C sequencing of fungal sample Apiospora malaysiana
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Organism:
Scientific Name(Taxon Id): Apiospora malaysiana (1337666) Common Name:
Other Info
- Abstract: Apiospora malaysiana was investigated using Hi-C sequencing to elucidate its three-dimensional genome organization. The purpose of this study was to generate a chromosome-level genome assembly and to understand higher-order chromatin architecture in this fungal species. Hi-C sequencing was formulated as the core approach to capture long-range chromosomal interactions, enabling accurate scaffolding of contigs and visualization of spatial genome organization. This strategy provides a comprehensive framework for studying genome structure, regulation, and evolutionary features in A. malaysiana.
- Linked publications:
- Center Name: Sucheta Tripathy, CSIR-IICB Kolkata
- Number of Base(Total) Mbp: 10,915,225,904
- Size in bytes(Total): 8,550,470,358
- Number of sample:
- Number of Runs:
- Number of Sequences:
- Number of Assembly:
- Number of Variant files:
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